15:03:2009 21:54 This is an OWL translation of an ontology whose native representational form is .obo. The translation was performed using the oboInOwl xslt library. For details, see http://www.berkeleybop.org/obo-conv.cgi maltose metabolic process maltose biosynthetic process maltose catabolic process very-long-chain fatty acid metabolic process citrulline metabolic process sulfur amino acid metabolic process sulfur amino acid biosynthetic process sulfur amino acid catabolic process sulfur amino acid transport histidine biosynthetic process rRNA modification tryptophan biosynthetic process allantoin metabolic process allantoin catabolic process peptidoglycan metabolic process polysaccharide biosynthetic process polysaccharide catabolic process lipoic acid metabolic process spermine transport sulfite transport guanine nucleotide transport prostaglandin biosynthetic process retinoid metabolic process ganglioside metabolic process ganglioside biosynthetic process long-chain fatty acid metabolic process histamine metabolic process histamine biosynthetic process histamine catabolic process beta-alanine transport serotonin secretion histamine secretion selenium metabolic process phenazine biosynthetic process peptide secretion carbohydrate metabolic process polysaccharide metabolic process glycogen metabolic process glycogen biosynthetic process glycogen catabolic process starch metabolic process starch catabolic process disaccharide metabolic process sucrose metabolic process sucrose biosynthetic process sucrose catabolic process lactose metabolic process lactose biosynthetic process lactose catabolic process trehalose metabolic process trehalose biosynthetic process trehalose catabolic process melibiose metabolic process melibiose catabolic process monosaccharide metabolic process xylulose metabolic process xylulose catabolic process xylulose biosynthetic process fructose metabolic process fructose catabolic process fucose metabolic process L-fucose biosynthetic process glucose metabolic process glucose catabolic process UDP-glucose metabolic process galactose metabolic process mannose metabolic process D-ribose metabolic process 2-deoxyribose 1-phosphate biosynthetic process deoxyribose 1-phosphate catabolic process aminoglycan metabolic process aminoglycan biosynthetic process glycosaminoglycan biosynthetic process galactosaminoglycan biosynthetic process aminoglycan catabolic process glycosaminoglycan catabolic process galactosaminoglycan catabolic process proteoglycan metabolic process chitin metabolic process chitin biosynthetic process chitin catabolic process amino sugar metabolic process glucosamine metabolic process glucosamine biosynthetic process glucosamine catabolic process mannosamine metabolic process N-acetylneuraminate metabolic process hexitol metabolic process sorbitol metabolic process sorbitol biosynthetic process sorbitol catabolic process uronic acid metabolic process glucuronate catabolic process cellular alcohol metabolic process ethanol metabolic process ethanol catabolic process ethanol oxidation octanol metabolic process glycerol metabolic process cellular glucan metabolic process cellular aldehyde metabolic process acetate metabolic process acetyl-CoA metabolic process acetyl-CoA biosynthetic process lactate metabolic process pyruvate metabolic process gluconeogenesis citrate metabolic process isocitrate metabolic process 2-oxoglutarate metabolic process succinyl-CoA metabolic process succinate metabolic process fumarate metabolic process oxaloacetate metabolic process malate metabolic process glycerol biosynthetic process ethanol biosynthetic process NADH oxidation acetaldehyde metabolic process ferredoxin metabolic process nucleobase, nucleoside, nucleotide and nucleic acid metabolic process purine base metabolic process purine base catabolic process adenine catabolic process guanine catabolic process inosine catabolic process hypoxanthine oxidation xanthine oxidation purine nucleoside catabolic process adenosine catabolic process deoxyadenosine catabolic process purine nucleotide metabolic process purine nucleotide biosynthetic process nucleoside diphosphate phosphorylation purine ribonucleoside salvage adenine salvage adenosine salvage dAMP biosynthetic process cAMP biosynthetic process ADP biosynthetic process dADP biosynthetic process dADP phosphorylation dATP biosynthetic process GMP biosynthetic process guanine salvage guanosine salvage dGMP biosynthetic process cGMP biosynthetic process GTP biosynthetic process GTP catabolic process dGDP biosynthetic process dGDP phosphorylation IMP biosynthetic process inosine salvage IDP phosphorylation ITP catabolic process dIDP phosphorylation purine nucleotide catabolic process cAMP catabolic process ATP catabolic process dGTP catabolic process IMP catabolic process pyrimidine base metabolic process pyrimidine base catabolic process cytosine catabolic process thymine catabolic process 5-methylcytosine catabolic process uracil catabolic process pyrimidine nucleoside metabolic process thymidine catabolic process cytidine catabolic process deoxycytidine catabolic process uridine catabolic process deoxyuridine catabolic process pyrimidine nucleotide metabolic process pyrimidine nucleotide biosynthetic process UMP biosynthetic process uracil salvage UDP biosynthetic process dUMP biosynthetic process dUDP biosynthetic process UTP biosynthetic process dUTP biosynthetic process dTMP biosynthetic process dTDP biosynthetic process dTTP biosynthetic process cytidine salvage deoxycytidine salvage CMP salvage dCMP salvage dCDP biosynthetic process CTP biosynthetic process dCTP biosynthetic process pyrimidine nucleotide catabolic process dTDP catabolic process CMP catabolic process dCMP catabolic process dCDP catabolic process dCTP catabolic process CTP catabolic process UDP catabolic process dUDP catabolic process UDP-glucose catabolic process DNA metabolic process DNA replication DNA modification DNA catabolic process tRNA metabolic process tRNA modification RNA catabolic process mRNA catabolic process translation protein modification process protein amino acid phosphorylation dolichyl diphosphate biosynthetic process glycoprotein catabolic process peptide metabolic process cellular amino acid and derivative metabolic process amino acid metabolic process alanine metabolic process alanine biosynthetic process alanine catabolic process arginine metabolic process arginine biosynthetic process arginine catabolic process asparagine metabolic process asparagine biosynthetic process asparagine catabolic process aspartate metabolic process aspartate biosynthetic process aspartate catabolic process cysteine metabolic process glutamate metabolic process glutamate biosynthetic process glutamate catabolic process glutamine metabolic process glutamine biosynthetic process glutamine catabolic process glycine metabolic process glycine biosynthetic process glycine catabolic process histidine metabolic process histidine catabolic process isoleucine metabolic process isoleucine catabolic process leucine metabolic process leucine catabolic process lysine metabolic process lysine catabolic process methionine metabolic process S-adenosylmethioninamine biosynthetic process L-phenylalanine metabolic process L-phenylalanine catabolic process proline metabolic process proline biosynthetic process proline catabolic process L-serine metabolic process L-serine biosynthetic process L-serine catabolic process threonine metabolic process threonine catabolic process tryptophan metabolic process tryptophan catabolic process tyrosine metabolic process tyrosine biosynthetic process tyrosine catabolic process valine metabolic process valine catabolic process amino acid derivative metabolic process betaine metabolic process betaine biosynthetic process betaine catabolic process ethanolamine metabolic process acetylcholine catabolic process melanin metabolic process catecholamine metabolic process indolalkylamine metabolic process octopamine biosynthetic process ornithine metabolic process ornithine biosynthetic process ornithine catabolic process polyamine metabolic process polyamine biosynthetic process spermine biosynthetic process polyamine catabolic process creatine metabolic process creatine biosynthetic process creatinine catabolic process phosphocreatine metabolic process lipid metabolic process fatty acid metabolic process fatty acid biosynthetic process hexadecanal biosynthetic process unsaturated fatty acid biosynthetic process acyl-CoA metabolic process acylglycerol metabolic process monoacylglycerol biosynthetic process triglyceride metabolic process phospholipid metabolic process phosphatidylethanolamine biosynthetic process glycerophospholipid metabolic process diacylglycerol biosynthetic process phosphatidic acid biosynthetic process phosphatidylglycerol biosynthetic process phosphatidylcholine biosynthetic process phosphatidylinositol biosynthetic process glycerol ether metabolic process platelet activating factor biosynthetic process glycolipid metabolic process sphingolipid metabolic process sphinganine metabolic process sphinganine-1-phosphate metabolic process sphinganine-1-phosphate biosynthetic process sphingosine metabolic process phytosphingosine metabolic process ceramide metabolic process inositol phosphorylceramide metabolic process glucosylceramide metabolic process glucosylceramide biosynthetic process glucosylceramide catabolic process galactosylceramide metabolic process galactosylceramide biosynthetic process galactosylceramide catabolic process glycosphingolipid metabolic process glycosphingolipid biosynthetic process ganglioside catabolic process icosanoid metabolic process leukotriene metabolic process prostanoid metabolic process prostaglandin metabolic process steroid biosynthetic process cholesterol biosynthetic process ergosterol biosynthetic process ecdysone biosynthetic process bile acid biosynthetic process progesterone biosynthetic process androgen biosynthetic process estrogen biosynthetic process glucocorticoid biosynthetic process mineralocorticoid biosynthetic process steroid catabolic process cholesterol catabolic process ecdysone catabolic process progesterone catabolic process androgen catabolic process estrogen catabolic process mineralocorticoid catabolic process glucocorticoid catabolic process sesquiterpenoid metabolic process farnesol biosynthetic process juvenile hormone metabolic process juvenile hormone biosynthetic process juvenile hormone catabolic process isoprenoid metabolic process terpenoid metabolic process triterpenoid metabolic process cellular aromatic compound metabolic process ommochrome biosynthetic process pteridine biosynthetic process tetrahydrobiopterin biosynthetic process coenzyme metabolic process NADH metabolic process nicotinamide riboside catabolic process NADP metabolic process NADP biosynthetic process NADP catabolic process ubiquinone metabolic process ubiquinone biosynthetic process FADH2 metabolic process FAD biosynthetic process lipoamide metabolic process glutathione metabolic process glutathione biosynthetic process glutathione catabolic process group transfer coenzyme metabolic process nucleoside phosphate metabolic process ATP biosynthetic process ADP phosphorylation folic acid and derivative metabolic process vitamin metabolic process water-soluble vitamin metabolic process biotin metabolic process nicotinamide metabolic process riboflavin metabolic process thiamin metabolic process fat-soluble vitamin metabolic process vitamin A metabolic process porphyrin metabolic process porphyrin biosynthetic process uroporphyrinogen III biosynthetic process heme biosynthetic process heme a biosynthetic process heme b biosynthetic process porphyrin catabolic process heme oxidation sulfur metabolic process phosphorus metabolic process phosphate metabolic process polyphosphate metabolic process polyphosphate catabolic process polyphosphate biosynthetic process oxygen and reactive oxygen species metabolic process superoxide metabolic process xenobiotic metabolic process nitrogen compound metabolic process nitric oxide biosynthetic process ion transport cation transport potassium ion transport sodium ion transport calcium ion transport phosphate transport hydrogen transport anion transport chloride transport zinc ion transport water transport dicarboxylic acid transport neurotransmitter transport serotonin transport tricarboxylic acid transport acyl carnitine transport acetate transport pyruvate transport oligopeptide transport nucleotide transport purine transport pyrimidine nucleotide transport amino acid transport asparagine transport glutamine transport lipid transport neurotransmitter secretion para-aminobenzoic acid biosynthetic process steroid metabolic process cholesterol metabolic process ergosterol metabolic process ecdysone metabolic process bile acid metabolic process androgen metabolic process estrogen metabolic process glucocorticoid metabolic process mineralocorticoid metabolic process spermine metabolic process spermidine metabolic process sulfate transport acetylcholine metabolic process acetylcholine biosynthetic process spermidine biosynthetic process isoprenoid biosynthetic process isoprenoid catabolic process lipid biosynthetic process pyridoxine metabolic process pyridoxine biosynthetic process guanosine metabolic process 7-methylguanosine metabolic process carbohydrate transport hexose transport amino acid biosynthetic process lipopolysaccharide metabolic process phospholipid biosynthetic process pyrimidine salvage glycopeptide catabolic process macromolecule catabolic process macromolecule biosynthetic process fatty acid catabolic process amino acid catabolic process aromatic amino acid family metabolic process aromatic amino acid family biosynthetic process aromatic amino acid family catabolic process branched chain family amino acid metabolic process branched chain family amino acid biosynthetic process branched chain family amino acid catabolic process lysine biosynthetic process methionine biosynthetic process methionine catabolic process threonine biosynthetic process homoserine biosynthetic process homoserine catabolic process homoserine metabolic process cysteine catabolic process L-phenylalanine biosynthetic process isoleucine biosynthetic process leucine biosynthetic process valine biosynthetic process glycoprotein metabolic process glycoprotein biosynthetic process biotin biosynthetic process lipopolysaccharide biosynthetic process lipopolysaccharide catabolic process lipoic acid biosynthetic process lipoate metabolic process lipoate biosynthetic process coenzyme biosynthetic process coenzyme catabolic process vitamin biosynthetic process vitamin catabolic process nucleobase metabolic process purine base biosynthetic process hypoxanthine catabolic process xanthine catabolic process nucleoside metabolic process nucleotide metabolic process ribonucleoside metabolic process deoxyribonucleoside metabolic process nucleoside monophosphate metabolic process nucleoside monophosphate biosynthetic process nucleoside monophosphate catabolic process purine nucleoside monophosphate metabolic process purine nucleoside monophosphate biosynthetic process purine nucleoside monophosphate catabolic process pyrimidine nucleoside monophosphate metabolic process pyrimidine nucleoside monophosphate biosynthetic process pyrimidine nucleoside monophosphate catabolic process nucleoside diphosphate metabolic process nucleoside diphosphate biosynthetic process nucleoside diphosphate catabolic process purine nucleoside diphosphate metabolic process purine nucleoside diphosphate biosynthetic process purine nucleoside diphosphate catabolic process pyrimidine nucleoside diphosphate metabolic process pyrimidine nucleoside diphosphate biosynthetic process pyrimidine nucleoside diphosphate catabolic process nucleoside triphosphate metabolic process nucleoside triphosphate biosynthetic process nucleoside triphosphate catabolic process purine nucleoside triphosphate metabolic process purine nucleoside triphosphate biosynthetic process purine nucleoside triphosphate catabolic process pyrimidine nucleoside triphosphate metabolic process pyrimidine nucleoside triphosphate biosynthetic process pyrimidine nucleoside triphosphate catabolic process purine ribonucleotide metabolic process purine ribonucleotide biosynthetic process purine ribonucleotide catabolic process ribonucleoside monophosphate biosynthetic process ribonucleoside monophosphate catabolic process ribonucleoside monophosphate metabolic process nucleoside biosynthetic process nucleoside catabolic process nucleotide biosynthetic process nucleotide catabolic process purine ribonucleoside monophosphate metabolic process purine ribonucleoside monophosphate biosynthetic process purine ribonucleoside monophosphate catabolic process pyrimidine ribonucleoside monophosphate metabolic process pyrimidine ribonucleoside monophosphate biosynthetic process pyrimidine ribonucleoside monophosphate catabolic process purine ribonucleoside diphosphate metabolic process purine ribonucleoside diphosphate biosynthetic process purine ribonucleoside diphosphate catabolic process ribonucleoside diphosphate metabolic process cyclic nucleotide metabolic process ribonucleoside diphosphate biosynthetic process cyclic nucleotide biosynthetic process ribonucleoside diphosphate catabolic process pyrimidine ribonucleoside diphosphate metabolic process pyrimidine ribonucleoside diphosphate biosynthetic process pyrimidine ribonucleoside diphosphate catabolic process ribonucleoside triphosphate metabolic process deoxyribonucleoside triphosphate metabolic process ribonucleoside triphosphate biosynthetic process deoxyribonucleoside triphosphate biosynthetic process ribonucleoside triphosphate catabolic process deoxyribonucleoside triphosphate catabolic process purine ribonucleoside triphosphate metabolic process purine ribonucleoside triphosphate biosynthetic process purine ribonucleoside triphosphate catabolic process pyrimidine ribonucleoside triphosphate metabolic process pyrimidine ribonucleoside triphosphate biosynthetic process pyrimidine ribonucleoside triphosphate catabolic process pyrimidine deoxyribonucleoside triphosphate metabolic process pyrimidine deoxyribonucleoside triphosphate biosynthetic process pyrimidine deoxyribonucleoside triphosphate catabolic process cyclic nucleotide catabolic process purine deoxyribonucleoside triphosphate metabolic process purine deoxyribonucleoside triphosphate biosynthetic process purine deoxyribonucleoside triphosphate catabolic process pyrimidine ribonucleotide metabolic process pyrimidine ribonucleotide biosynthetic process pyrimidine ribonucleotide catabolic process CMP biosynthetic process nucleotide-sugar metabolic process nucleotide-sugar biosynthetic process nucleotide-sugar catabolic process thiamin biosynthetic process thiamin diphosphate biosynthetic process thiamin catabolic process riboflavin biosynthetic process riboflavin catabolic process menaquinone metabolic process menaquinone biosynthetic process cobalamin metabolic process cobalamin biosynthetic process siderophore metabolic process enterobactin metabolic process enterobactin biosynthetic process isopentenyl diphosphate biosynthetic process lipid A biosynthetic process glycolipid biosynthetic process glucan biosynthetic process glucan catabolic process peptidoglycan biosynthetic process peptidoglycan catabolic process 10-formyltetrahydrofolate catabolic process ribonucleotide metabolic process ribonucleotide biosynthetic process ribonucleotide catabolic process 2'-deoxyribonucleotide biosynthetic process GDP-mannose biosynthetic process mRNA transcription rRNA transcription tRNA transcription protein secretion cellular amine metabolic process amine biosynthetic process amine catabolic process oligosaccharide metabolic process oligosaccharide biosynthetic process oligosaccharide catabolic process 2'-deoxyribonucleotide metabolic process phospholipid catabolic process folic acid and derivative biosynthetic process folic acid and derivative catabolic process FMN biosynthetic process toxin biosynthetic process toxin metabolic process toxin catabolic process chorismate biosynthetic process NAD biosynthetic process glyoxylate catabolic process carnitine metabolic process methylglyoxal metabolic process cyanate metabolic process cyanate catabolic process glycolate metabolic process pyridoxal 5'-phosphate salvage pyruvate oxidation putrescine metabolic process putrescine biosynthetic process putrescine catabolic process gamma-aminobutyric acid metabolic process gamma-aminobutyric acid biosynthetic process gamma-aminobutyric acid catabolic process RNA modification detection of light stimulus detection of chemical stimulus indoleacetic acid metabolic process indoleacetic acid biosynthetic process gibberellin metabolic process gibberellin biosynthetic process abscisic acid metabolic process abscisic acid biosynthetic process cytokinin metabolic process cytokinin biosynthetic process ethylene metabolic process ethylene biosynthetic process jasmonic acid metabolic process jasmonic acid biosynthetic process salicylic acid metabolic process salicylic acid biosynthetic process phenylpropanoid metabolic process phenylpropanoid biosynthetic process indole phytoalexin biosynthetic process benzyl isoquinoline alkaloid biosynthetic process tropane alkaloid biosynthetic process purine alkaloid biosynthetic process catechol metabolic process catechol biosynthetic process chalcone metabolic process chalcone biosynthetic process isoflavonoid biosynthetic process anthocyanin biosynthetic process detection of hormone stimulus detection of auxin stimulus detection of cytokinin stimulus detection of abscisic acid stimulus detection of ethylene stimulus detection of gibberellic acid stimulus detection of brassinosteroid stimulus detection of carbohydrate stimulus detection of sucrose stimulus detection of hexose stimulus detection of salicylic acid stimulus detection of jasmonic acid stimulus cinnamic acid biosynthetic process cinnamic acid ester metabolic process cinnamic acid ester biosynthetic process cinnamic acid metabolic process coumarin metabolic process coumarin biosynthetic process lignan metabolic process lignan biosynthetic process lignin metabolic process lignin biosynthetic process stilbene metabolic process stilbene biosynthetic process flavonoid metabolic process flavonoid biosynthetic process alkaloid metabolic process alkaloid biosynthetic process alkaloid catabolic process cytokinin catabolic process auxin metabolic process auxin biosynthetic process auxin catabolic process hormone transport xyloglucan biosynthetic process amylopectin biosynthetic process proanthocyanidin biosynthetic process phytochromobilin biosynthetic process camalexin biosynthetic process phenylacetate catabolic process mycothiol biosynthetic process mycothiol metabolic process pyrimidine ribonucleotide salvage cutin biosynthetic process fructan metabolic process fructan biosynthetic process fructan catabolic process cytokinin transport vitamin E biosynthetic process plastoquinone biosynthetic process myo-inositol hexakisphosphate biosynthetic process lithium ion transport glucomannan metabolic process galactoglucomannan metabolic process galacturonan metabolic process xylogalacturonan metabolic process xyloglucan metabolic process mannan metabolic process glucuronoarabinoxylan metabolic process arabinoxylan metabolic process glutamine secretion dopamine secretion glutamate secretion gamma-aminobutyric acid secretion