format-version: 1.2 idspace: BIRN_ImagePhenotype http://ccdb.ucsd.edu/SAO/DPO/1.0/ImagePhenotype.owl "" idspace: BIRN_PDPO http://ccdb.ucsd.edu/PDPhenotypeOntology/1.0# "" idspace: BIRN_PDStage http://ccdb.ucsd.edu/PDStageOntology/1.0/ "" idspace: BIRN_SA http://ccdb.ucsd.edu/smart_atlas_ontology/sa.owl# "" idspace: NDPO http://ccdb.ucsd.edu/SAO/Disease/1.0/NDPO.owl# "" idspace: PKB http://ccdb.ucsd.edu/PKB/1.0/PKB.owl# "" idspace: SAO_HumanDPO http://ccdb.ucsd.edu/SAO/HumanDPO.owl# "" idspace: bfo http://www.ifomis.org/bfo/1.1# "" idspace: bfo1_0 http://www.ifomis.org/bfo/1.0# "" idspace: biopax1 http://www.biopax.org/release/biopax-level1.owl# "" idspace: birnlex_anatomy http://purl.org/nbirn/birnlex/ontology/BIRNLex-Anatomy.owl# "" idspace: birnlex_disease http://purl.org/nbirn/birnlex/ontology/BIRNLex-Disease.owl# "" idspace: birnlex_tax http://purl.org/nbirn/birnlex/ontology/BIRNLex-OrganismalTaxonomy.owl# "" idspace: dc http://purl.org/dc/elements/1.1/ "" idspace: dcterms http://purl.org/dc/terms/ "" idspace: eor http://dublincore.org/2000/03/13/eor# "" idspace: galen http://www.co-ode.org/ontologies/galen# "" idspace: mged http://mged.sourceforge.net/ontologies/MGEDOntology.owl# "" idspace: oban http://www.berkeleybop.org/ontologies/oban/alpha# "" idspace: obd http://www.bioontology.org/obd/obd-ontology# "" idspace: oboInOwl http://www.geneontology.org/formats/oboInOwl# "" idspace: owl http://www.w3.org/2002/07/owl# "" idspace: propreo http://lsdis.cs.uga.edu/projects/glycomics/propreo# "" idspace: rdf http://www.w3.org/1999/02/22-rdf-syntax-ns# "" idspace: rdfs http://www.w3.org/2000/01/rdf-schema# "" idspace: reactome http://www.reactome.org/biopax# "" idspace: sao http://ccdb.ucsd.edu/SAO/1.2# "" idspace: serql http://www.openrdf.org/schema/serql# "" idspace: skos http://www.w3.org/2004/02/skos/core# "" idspace: snap http://www.ifomis.org/bfo/1.1/snap# "" idspace: snap1_0 http://www.ifomis.org/bfo/1.0/snap# "" idspace: span http://www.ifomis.org/bfo/1.1/span# "" idspace: span1_0 http://www.ifomis.org/bfo/1.0/span# "" idspace: xsd http://www.w3.org/2001/XMLSchema# "" [Term] id: bfo:Entity name: entity namespace: union_of: snap:Continuant ! continuant union_of: span:Occurrent ! occurrent [Term] id: snap:Continuant name: continuant namespace: def: "An entity [bfo:Entity] that exists in full at any time in which it exists at all, persists through time while maintaining its identity and has no temporal parts." [] comment: Definition: An entity [bfo:Entity] that exists in full at any time in which it exists at all, persists through time while maintaining its identity and has no temporal parts. comment: Examples: a heart, a person, the color of a tomato, the mass of a cloud, a symphony orchestra, the disposition of blood to coagulate, the lawn and atmosphere in front of our building comment: Synonyms: endurant synonym: "endurant" [] is_a: bfo:Entity ! entity disjoint_from: span:Occurrent ! occurrent union_of: snap:DependentContinuant ! dependent_continuant union_of: snap:IndependentContinuant ! independent_continuant union_of: snap:SpatialRegion ! spatial_region property_value: has_example "a heart" xsd:string property_value: has_example "a person" xsd:string property_value: has_example "a symphony orchestra" xsd:string property_value: has_example "the color of a tomato" xsd:string property_value: has_example "the disposition of blood to coagulate" xsd:string property_value: has_example "the lawn and atmosphere in front of our building" xsd:string property_value: has_example "the mass of a cloud" xsd:string [Term] id: snap:DependentContinuant name: dependent_continuant namespace: def: "A continuant [snap:Continuant] that is either dependent on one or other independent continuant [snap:IndependentContinuant] bearers or inheres in or is borne by other entities." [] comment: Definition: A continuant [snap:Continuant] that is either dependent on one or other independent continuant [snap:IndependentContinuant] bearers or inheres in or is borne by other entities. is_a: snap:Continuant ! continuant disjoint_from: snap:IndependentContinuant ! independent_continuant disjoint_from: snap:SpatialRegion ! spatial_region union_of: snap:GenericallyDependentContinuant ! generically_dependent_continuant union_of: snap:SpecificallyDependentContinuant ! specifically_dependent_continuant [Term] id: snap:Disposition name: disposition namespace: def: "A realizable entity [snap:RealizableEntity] that essentially causes a specific process or transformation in the object [snap:Object] in which it inheres, under specific circumstances and in conjunction with the laws of nature. A general formula for dispositions is: X (object [snap:Object] has the disposition D to (transform, initiate a process) R under conditions C." [] comment: Definition: A realizable entity [snap:RealizableEntity] that essentially causes a specific process or transformation in the object [snap:Object] in which it inheres, under specific circumstances and in conjunction with the laws of nature. A general formula for dispositions is: X (object [snap:Object] has the disposition D to (transform, initiate a process) R under conditions C. comment: Examples: the disposition of vegetables to decay when not refrigerated, the disposition of a vase to brake if dropped, the disposition of blood to coagulate, the disposition of a patient with a weakened immune system to contract disease, the disposition of metal to conduct electricity. is_a: snap:RealizableEntity ! realizable_entity disjoint_from: snap:Function ! function disjoint_from: snap:Role ! role property_value: has_example "the disposition of a patient with a weakened immune system to contract disease" xsd:string property_value: has_example "the disposition of a vase to brake if dropped" xsd:string property_value: has_example "the disposition of blood to coagulate" xsd:string property_value: has_example "the disposition of metal to conduct electricity." xsd:string property_value: has_example "the disposition of vegetables to decay when not refrigerated" xsd:string [Term] id: snap:FiatObjectPart name: fiat_object_part namespace: def: "A material entity [snap:MaterialEntity] that is part of an object [snap:Object] but is not demarcated by any physical discontinuities." [] comment: Definition: A material entity [snap:MaterialEntity] that is part of an object [snap:Object] but is not demarcated by any physical discontinuities. comment: Examples: upper and lower lobes of the left lung, the dorsal and ventral surfaces of the body, the east side of Saarbruecken, the lower right portion of a human torso comment: Synonyms: fiat substance part synonym: "fiat substance part" [] is_a: snap:MaterialEntity ! material_entity disjoint_from: snap:Object ! object disjoint_from: snap:ObjectAggregate ! object_aggregate property_value: has_example "the dorsal and ventral surfaces of the body" xsd:string property_value: has_example "the east side of Saarbruecken" xsd:string property_value: has_example "the lower right portion of a human torso" xsd:string property_value: has_example "upper and lower lobes of the left lung" xsd:string [Term] id: snap:Function name: function namespace: def: "A realizable entity [snap:RealizableEntity] the manifestation of which is an essentially end-directed activity of a continuant [snap:Continuant] entity in virtue of that continuant [snap:Continuant] entity being a specific kind of entity in the kind or kinds of contexts that it is made for." [] comment: Definition: A realizable entity [snap:RealizableEntity] the manifestation of which is an essentially end-directed activity of a continuant [snap:Continuant] entity in virtue of that continuant [snap:Continuant] entity being a specific kind of entity in the kind or kinds of contexts that it is made for. comment: Examples: the function of a birth canal to enable transport, the function of the heart in the body: to pump blood, to receive de-oxygenated and oxygenated blood, etc., the function of reproduction in the transmission of genetic material, the digestive function of the stomach to nutriate the body, the function of a hammer to drive in nails, the function of a computer program to compute mathematical equations, the function of an automobile to provide transportation, the function of a judge in a court of law is_a: snap:RealizableEntity ! realizable_entity disjoint_from: snap:Disposition ! disposition disjoint_from: snap:Role ! role property_value: has_example "etc." xsd:string property_value: has_example "the digestive function of the stomach to nutriate the body" xsd:string property_value: has_example "the function of a birth canal to enable transport" xsd:string property_value: has_example "the function of a computer program to compute mathematical equations" xsd:string property_value: has_example "the function of a hammer to drive in nails" xsd:string property_value: has_example "the function of a judge in a court of law" xsd:string property_value: has_example "the function of an automobile to provide transportation" xsd:string property_value: has_example "the function of reproduction in the transmission of genetic material" xsd:string property_value: has_example "the function of the heart in the body: to pump blood" xsd:string property_value: has_example "to receive de-oxygenated and oxygenated blood" xsd:string [Term] id: snap:GenericallyDependentContinuant name: generically_dependent_continuant namespace: def: "A continuant [snap:Continuant] that is dependent on one or other independent continuant [snap:IndependentContinuant] bearers. For every instance of A requires some instance of (an independent continuant [snap:IndependentContinuant] type) B but which instance of B serves can change from time to time." [] comment: Definition: A continuant [snap:Continuant] that is dependent on one or other independent continuant [snap:IndependentContinuant] bearers. For every instance of A requires some instance of (an independent continuant [snap:IndependentContinuant] type) B but which instance of B serves can change from time to time. comment: Examples: a certain PDF file that exists in different and in several hard drives is_a: snap:DependentContinuant ! dependent_continuant disjoint_from: snap:SpecificallyDependentContinuant ! specifically_dependent_continuant property_value: has_example "a certain PDF file that exists in different and in several hard drives" xsd:string [Term] id: snap:IndependentContinuant name: independent_continuant namespace: def: "A continuant [snap:Continuant] that is a bearer of quality [snap:Quality] and realizable entity [snap:RealizableEntity] entities, in which other entities inhere and which itself cannot inhere in anything." [] comment: Definition: A continuant [snap:Continuant] that is a bearer of quality [snap:Quality] and realizable entity [snap:RealizableEntity] entities, in which other entities inhere and which itself cannot inhere in anything. comment: Examples: an organism, a heart, a leg, a person, a symphony orchestra, a chair, the bottom right portion of a human torso, the lawn and atmosphere in front of our building comment: Synonyms: substantial entity synonym: "substantial entity" [] is_a: snap:Continuant ! continuant disjoint_from: snap:DependentContinuant ! dependent_continuant disjoint_from: snap:SpatialRegion ! spatial_region union_of: snap:MaterialEntity ! material_entity union_of: snap:ObjectBoundary ! object_boundary union_of: snap:Site ! site property_value: has_example "a chair" xsd:string property_value: has_example "a heart" xsd:string property_value: has_example "a leg" xsd:string property_value: has_example "a person" xsd:string property_value: has_example "a symphony orchestra" xsd:string property_value: has_example "an organism" xsd:string property_value: has_example "the bottom right portion of a human torso" xsd:string property_value: has_example "the lawn and atmosphere in front of our building" xsd:string [Term] id: snap:MaterialEntity name: material_entity namespace: def: "An independent continuant [snap:IndependentContinuant] that is spatially extended whose identity is independent of that of other entities and can be maintained through time. Note: Material entity [snap:MaterialEntity] subsumes object [snap:Object], fiat object part [snap:FiatObjectPart], and object aggregate [snap:ObjectAggregate], which assume a three level theory of granularity, which is inadequate for some domains, such as biology." [] comment: Definition: An independent continuant [snap:IndependentContinuant] that is spatially extended whose identity is independent of that of other entities and can be maintained through time. Note: Material entity [snap:MaterialEntity] subsumes object [snap:Object], fiat object part [snap:FiatObjectPart], and object aggregate [snap:ObjectAggregate], which assume a three level theory of granularity, which is inadequate for some domains, such as biology. comment: Examples: collection of random bacteria, a chair, dorsal surface of the body is_a: snap:IndependentContinuant ! independent_continuant disjoint_from: snap:ObjectBoundary ! object_boundary disjoint_from: snap:Site ! site union_of: snap:FiatObjectPart ! fiat_object_part union_of: snap:Object ! object union_of: snap:ObjectAggregate ! object_aggregate property_value: has_example "a chair" xsd:string property_value: has_example "collection of random bacteria" xsd:string property_value: has_example "dorsal surface of the body" xsd:string [Term] id: snap:Object name: object namespace: def: "A material entity [snap:MaterialEntity] that is spatially extended, maximally self-connected and self-contained (the parts of a substance are not separated from each other by spatial gaps) and possesses an internal unity. The identity of substantial object [snap:Object] entities is independent of that of other entities and can be maintained through time." [] comment: Definition: A material entity [snap:MaterialEntity] that is spatially extended, maximally self-connected and self-contained (the parts of a substance are not separated from each other by spatial gaps) and possesses an internal unity. The identity of substantial object [snap:Object] entities is independent of that of other entities and can be maintained through time. comment: Examples: an organism, a heart, a chair, a lung, an apple comment: Synonyms: substance synonym: "substance" [] is_a: snap:MaterialEntity ! material_entity disjoint_from: snap:FiatObjectPart ! fiat_object_part disjoint_from: snap:ObjectAggregate ! object_aggregate property_value: has_example "a chair" xsd:string property_value: has_example "a heart" xsd:string property_value: has_example "a lung" xsd:string property_value: has_example "an apple" xsd:string property_value: has_example "an organism" xsd:string [Term] id: snap:ObjectAggregate name: object_aggregate namespace: def: "A material entity [snap:MaterialEntity] that is a mereological sum of separate object [snap:Object] entities and possesses non-connected boundaries." [] comment: Definition: A material entity [snap:MaterialEntity] that is a mereological sum of separate object [snap:Object] entities and possesses non-connected boundaries. comment: Examples: a heap of stones, a group of commuters on the subway, a collection of random bacteria, a flock of geese, the patients in a hospital comment: Synonyms: substance aggregate synonym: "substance aggregate" [] is_a: snap:MaterialEntity ! material_entity disjoint_from: snap:FiatObjectPart ! fiat_object_part disjoint_from: snap:Object ! object property_value: has_example "a collection of random bacteria" xsd:string property_value: has_example "a flock of geese" xsd:string property_value: has_example "a group of commuters on the subway" xsd:string property_value: has_example "a heap of stones" xsd:string property_value: has_example "the patients in a hospital" xsd:string [Term] id: snap:ObjectBoundary name: object_boundary namespace: def: "An independent continuant [snap:IndependentContinuant] that is a lower dimensional part of a spatial entity, normally a closed two-dimensional surface. Boundaries are those privileged parts of object [snap:Object] entities that exist at exactly the point where the object [snap:Object] is separated off from the rest of the existing entities in the world." [] comment: Comment: Boundaries are theoretically difficult entities to account for, however the intuitive notion of a physical boundary as a surface of some sort (whether inside or outside of a thing) will generally serve as a good guide for the use of this universal. comment: Definition: An independent continuant [snap:IndependentContinuant] that is a lower dimensional part of a spatial entity, normally a closed two-dimensional surface. Boundaries are those privileged parts of object [snap:Object] entities that exist at exactly the point where the object [snap:Object] is separated off from the rest of the existing entities in the world. comment: Examples: the surface of the skin, the surface of the earth, the surface of the interior of the stomach, the outer surface of a cell or cell wall comment: Synonyms: substance boundary synonym: "substance boundary" [] is_a: snap:IndependentContinuant ! independent_continuant disjoint_from: snap:FiatObjectPart ! fiat_object_part disjoint_from: snap:Object ! object disjoint_from: snap:ObjectAggregate ! object_aggregate disjoint_from: snap:Site ! site property_value: has_example "the outer surface of a cell or cell wall" xsd:string property_value: has_example "the surface of the earth" xsd:string property_value: has_example "the surface of the interior of the stomach" xsd:string property_value: has_example "the surface of the skin" xsd:string [Term] id: snap:OneDimensionalRegion name: one_dimensional_region namespace: def: "A spatial region [snap:SpatialRegion] with one dimension." [] comment: Definition: A spatial region [snap:SpatialRegion] with one dimension. comment: Examples: the part of space that is a line stretching from one end of absolute space to the other, an edge of a cube-shaped part of space is_a: snap:SpatialRegion ! spatial_region disjoint_from: snap:ThreeDimensionalRegion ! three_dimensional_region disjoint_from: snap:TwoDimensionalRegion ! two_dimensional_region disjoint_from: snap:ZeroDimensionalRegion ! zero_dimensional_region property_value: has_example "an edge of a cube-shaped part of space" xsd:string property_value: has_example "the part of space that is a line stretching from one end of absolute space to the other" xsd:string [Term] id: snap:Quality name: quality namespace: def: "A specifically dependent continuant [snap:SpecificallyDependentContinuant] that is exhibited if it inheres in an entity or entities at all (a categorical property)." [] comment: Definition: A specifically dependent continuant [snap:SpecificallyDependentContinuant] that is exhibited if it inheres in an entity or entities at all (a categorical property). comment: Examples: the color of a tomato, the ambient temperature of air, the circumference of a waist, the shape of a nose, the mass of a piece of gold, the weight of a chimpanzee is_a: snap:SpecificallyDependentContinuant ! specifically_dependent_continuant disjoint_from: snap:RealizableEntity ! realizable_entity property_value: has_example "the ambient temperature of air" xsd:string property_value: has_example "the circumference of a waist" xsd:string property_value: has_example "the color of a tomato" xsd:string property_value: has_example "the mass of a piece of gold" xsd:string property_value: has_example "the shape of a nose" xsd:string property_value: has_example "the weight of a chimpanzee" xsd:string [Term] id: snap:RealizableEntity name: realizable_entity namespace: def: "A specifically dependent continuant [snap:SpecificallyDependentContinuant] that inheres in continuant [snap:Continuant] entities and are not exhibited in full at every time in which it inheres in an entity or group of entities. The exhibition or actualization of a realizable entity is a particular manifestation, functioning or process that occurs under certain circumstances." [] comment: Comment: If a realizable entity [snap:RealizableEntity] inheres in a continuant [snap:Continuant], this does not imply that it is actually realized. comment: Definition: A specifically dependent continuant [snap:SpecificallyDependentContinuant] that inheres in continuant [snap:Continuant] entities and are not exhibited in full at every time in which it inheres in an entity or group of entities. The exhibition or actualization of a realizable entity is a particular manifestation, functioning or process that occurs under certain circumstances. comment: Examples: the role of being a doctor, the function of the reproductive organs, the disposition of blood to coagulate, the disposition of metal to conduct electricity is_a: snap:SpecificallyDependentContinuant ! specifically_dependent_continuant disjoint_from: snap:Quality ! quality property_value: has_example "the disposition of blood to coagulate" xsd:string property_value: has_example "the disposition of metal to conduct electricity" xsd:string property_value: has_example "the function of the reproductive organs" xsd:string property_value: has_example "the role of being a doctor" xsd:string [Term] id: snap:Role name: role namespace: def: "A realizable entity [snap:RealizableEntity] the manifestation of which brings about some result or end that is not essential to a continuant [snap:Continuant] in virtue of the kind of thing that it is but that can be served or participated in by that kind of continuant [snap:Continuant] in some kinds of natural, social or institutional contexts." [] comment: Definition: A realizable entity [snap:RealizableEntity] the manifestation of which brings about some result or end that is not essential to a continuant [snap:Continuant] in virtue of the kind of thing that it is but that can be served or participated in by that kind of continuant [snap:Continuant] in some kinds of natural, social or institutional contexts. comment: Examples: the role of a person as a surgeon, the role of a chemical compound in an experiment, the role of a patient relative as defined by a hospital administrative form, the role of a woman as a legal mother in the context of system of laws, the role of a biological grandfather as legal guardian in the context of a system of laws, the role of ingested matter in digestion, the role of a student in a university is_a: snap:RealizableEntity ! realizable_entity disjoint_from: snap:Disposition ! disposition disjoint_from: snap:Function ! function property_value: has_example "the role of a biological grandfather as legal guardian in the context of a system of laws" xsd:string property_value: has_example "the role of a chemical compound in an experiment" xsd:string property_value: has_example "the role of a patient relative as defined by a hospital administrative form" xsd:string property_value: has_example "the role of a person as a surgeon" xsd:string property_value: has_example "the role of a student in a university" xsd:string property_value: has_example "the role of a woman as a legal mother in the context of system of laws" xsd:string property_value: has_example "the role of ingested matter in digestion" xsd:string [Term] id: snap:Site name: site namespace: def: "An independent continuant [snap:IndependentContinuant] consisting of a characteristic spatial shape in relation to some arrangement of other continuant [snap:Continuant] entities and of the medium which is enclosed in whole or in part by this characteristic spatial shape. Site [snap:Site] entities are entities that can be occupied by other continuant [snap:Continuant] entities." [] comment: Comment: An instance of Site [snap:Site] is a mixture of independent continuant [snap:IndependentContinuant] entities which act as surrounding environments for other independent continuant [snap:IndependentContinuant] entities, most importantly for instances of object [snap:Object]. A site [snap:Site] is typically made of object [snap:Object] or fiat object part [snap:FiatObjectPart] entities and a surrounding medium in which is found an object [snap:Object] occupying the site [snap:Site]. Independent continuant [snap:IndependentContinuant] entities may be associated with others (which, then, are site [snap:Site] entities) through a relation of \"occupation\". That relation is connected to, but distinct from, the relation of spatial location. Site [snap:Site] entities are not to be confused with spatial region [snap:SpatialRegion] entities. In BFO, site [snap:Site] allows for a so-called relational view of space which is different from the view corresponding to the class spatial region [snap:SpatialRegion] (see the comment on this class). comment: Definition: An independent continuant [snap:IndependentContinuant] consisting of a characteristic spatial shape in relation to some arrangement of other continuant [snap:Continuant] entities and of the medium which is enclosed in whole or in part by this characteristic spatial shape. Site [snap:Site] entities are entities that can be occupied by other continuant [snap:Continuant] entities. comment: Examples: a particular room in a particular hospital, Maria's nostril or her intestines for a variety of bacteria. is_a: snap:IndependentContinuant ! independent_continuant disjoint_from: snap:FiatObjectPart ! fiat_object_part disjoint_from: snap:Object ! object disjoint_from: snap:ObjectAggregate ! object_aggregate disjoint_from: snap:ObjectBoundary ! object_boundary property_value: has_example "Maria's nostril or her intestines for a variety of bacteria." xsd:string property_value: has_example "a particular room in a particular hospital" xsd:string [Term] id: snap:SpatialRegion name: spatial_region namespace: def: "A continuant [snap:Continuant] that is neither bearer of quality [snap:Quality] entities nor inheres in any other entities." [] comment: Comment: All instances of continuant [snap:Continuant] are spatial entities, that is, they enter in the relation of (spatial) location with spatial region [snap:SpatialRegion] entities. As a particular case, the exact spatial location of a spatial region [snap:SpatialRegion] is this region itself. comment: Comment: An instance of spatial region [snap:SpatialRegion] is a part of space. All parts of space are spatial region [snap:SpatialRegion] entities and only spatial region [snap:SpatialRegion] entities are parts of space. Space is the entire extent of the spatial universe, a designated individual, which is thus itself a spatial region [snap:SpatialRegion]. comment: Comment: Space and spatial region [snap:SpatialRegion] entities are entities in their own rights which exist independently of any entities which can be located at them. This view of space is sometimes called \"absolutist\" or \"the container view\". In BFO, the class site [snap:Site] allows for a so-called relational view of space, that is to say, a view according to which spatiality is a matter of relative location between entities and not a matter of being tied to space. The bridge between these two views is secured through the fact that while instances of site [snap:Site] are not spatial region [snap:SpatialRegion] entities, they are nevertheless spatial entities. comment: Definition: A continuant [snap:Continuant] that is neither bearer of quality [snap:Quality] entities nor inheres in any other entities. comment: Examples: the sum total of all space in the universe, parts of the sum total of all space in the universe is_a: snap:Continuant ! continuant disjoint_from: snap:DependentContinuant ! dependent_continuant disjoint_from: snap:IndependentContinuant ! independent_continuant union_of: snap:OneDimensionalRegion ! one_dimensional_region union_of: snap:ThreeDimensionalRegion ! three_dimensional_region union_of: snap:TwoDimensionalRegion ! two_dimensional_region union_of: snap:ZeroDimensionalRegion ! zero_dimensional_region property_value: has_example "parts of the sum total of all space in the universe" xsd:string property_value: has_example "the sum total of all space in the universe" xsd:string [Term] id: snap:SpecificallyDependentContinuant name: specifically_dependent_continuant namespace: def: "A continuant [snap:Continuant] that inheres in or is borne by other entities. Every instance of A requires some specific instance of B which must always be the same." [] comment: Definition: A continuant [snap:Continuant] that inheres in or is borne by other entities. Every instance of A requires some specific instance of B which must always be the same. comment: Examples: the mass of a cloud, the smell of mozzarella, the liquidity of blood, the color of a tomato, the disposition of fish to decay, the role of being a doctor, the function of the heart in the body: to pump blood, to receive de-oxygenated and oxygenated blood, etc. comment: Synonyms: property, trope, mode synonym: "mode" [] synonym: "property" [] synonym: "trope" [] is_a: snap:DependentContinuant ! dependent_continuant disjoint_from: snap:GenericallyDependentContinuant ! generically_dependent_continuant union_of: snap:Quality ! quality union_of: snap:RealizableEntity ! realizable_entity property_value: has_example "etc." xsd:string property_value: has_example "the color of a tomato" xsd:string property_value: has_example "the disposition of fish to decay" xsd:string property_value: has_example "the function of the heart in the body: to pump blood" xsd:string property_value: has_example "the liquidity of blood" xsd:string property_value: has_example "the mass of a cloud" xsd:string property_value: has_example "the role of being a doctor" xsd:string property_value: has_example "the smell of mozzarella" xsd:string property_value: has_example "to receive de-oxygenated and oxygenated blood" xsd:string [Term] id: snap:ThreeDimensionalRegion name: three_dimensional_region namespace: def: "A spatial region [snap:SpatialRegion] with three dimensions." [] comment: Definition: A spatial region [snap:SpatialRegion] with three dimensions. comment: Examples: a cube-shaped part of space, a sphere-shaped part of space is_a: snap:SpatialRegion ! spatial_region disjoint_from: snap:OneDimensionalRegion ! one_dimensional_region disjoint_from: snap:TwoDimensionalRegion ! two_dimensional_region disjoint_from: snap:ZeroDimensionalRegion ! zero_dimensional_region property_value: has_example "a cube-shaped part of space" xsd:string property_value: has_example "a sphere-shaped part of space" xsd:string [Term] id: snap:TwoDimensionalRegion name: two_dimensional_region namespace: def: "A spatial region [snap:SpatialRegion] with two dimensions." [] comment: Definition: A spatial region [snap:SpatialRegion] with two dimensions. comment: Examples: the surface of a cube-shaped part of space, the surface of a sphere-shaped part of space, the surface of a rectilinear planar figure-shaped part of space is_a: snap:SpatialRegion ! spatial_region disjoint_from: snap:OneDimensionalRegion ! one_dimensional_region disjoint_from: snap:ThreeDimensionalRegion ! three_dimensional_region disjoint_from: snap:ZeroDimensionalRegion ! zero_dimensional_region property_value: has_example "the surface of a cube-shaped part of space" xsd:string property_value: has_example "the surface of a rectilinear planar figure-shaped part of space" xsd:string property_value: has_example "the surface of a sphere-shaped part of space" xsd:string [Term] id: snap:ZeroDimensionalRegion name: zero_dimensional_region namespace: def: "A spatial region [snap:SpatialRegion] with no dimensions." [] comment: Definition: A spatial region [snap:SpatialRegion] with no dimensions. comment: Examples: a point is_a: snap:SpatialRegion ! spatial_region disjoint_from: snap:OneDimensionalRegion ! one_dimensional_region disjoint_from: snap:ThreeDimensionalRegion ! three_dimensional_region disjoint_from: snap:TwoDimensionalRegion ! two_dimensional_region property_value: has_example "a point" xsd:string [Term] id: span:ConnectedSpatiotemporalRegion name: connected_spatiotemporal_region namespace: def: "A spatiotemporal region [span:SpatiotemporalRegion] that has temporal and spatial dimensions such that all points within the spatiotemporal region are mediately or immediately connected to all other points within the same spatiotemporal region [span:SpatiotemporalRegion]." [] comment: Definition: A spatiotemporal region [span:SpatiotemporalRegion] that has temporal and spatial dimensions such that all points within the spatiotemporal region are mediately or immediately connected to all other points within the same spatiotemporal region [span:SpatiotemporalRegion]. comment: Examples: the spatial and temporal location of an individual organism's life, the spatial and temporal location of the development of a fetus is_a: span:SpatiotemporalRegion ! spatiotemporal_region disjoint_from: span:ScatteredSpatiotemporalRegion ! scattered_spatiotemporal_region union_of: span:SpatiotemporalInstant ! spatiotemporal_instant union_of: span:SpatiotemporalInterval ! spatiotemporal_interval property_value: has_example "the spatial and temporal location of an individual organism's life" xsd:string property_value: has_example "the spatial and temporal location of the development of a fetus" xsd:string [Term] id: span:ConnectedTemporalRegion name: connected_temporal_region namespace: def: "A temporal region [span:TemporalRegion] every point of which is mediately or immediately connected with every other point of which." [] comment: Definition: A temporal region [span:TemporalRegion] every point of which is mediately or immediately connected with every other point of which. comment: Examples: the 1970s years, the time from the beginning to the end of a heart attack, the time taken up by cellular meiosis is_a: span:TemporalRegion ! temporal_region disjoint_from: span:ScatteredTemporalRegion ! scattered_temporal_region union_of: span:TemporalInstant ! temporal_instant union_of: span:TemporalInterval ! temporal_interval property_value: has_example "the 1970s years" xsd:string property_value: has_example "the time from the beginning to the end of a heart attack" xsd:string property_value: has_example "the time taken up by cellular meiosis" xsd:string [Term] id: span:FiatProcessPart name: fiat_process_part namespace: def: "A processual entity [span:ProcessualEntity] that is part of a process but that does not have bona fide beginnings and endings corresponding to real discontinuities." [] comment: Definition: A processual entity [span:ProcessualEntity] that is part of a process but that does not have bona fide beginnings and endings corresponding to real discontinuities. comment: Examples: chewing during a meal, the middle part of a rainstorm, the worst part of a heart-attack, the most interesting part of Van Gogh's life is_a: span:ProcessualEntity ! processual_entity disjoint_from: span:Process ! process disjoint_from: span:ProcessAggregate ! process_aggregate disjoint_from: span:ProcessBoundary ! process_boundary disjoint_from: span:ProcessualContext ! processual_context property_value: has_example "chewing during a meal" xsd:string property_value: has_example "the middle part of a rainstorm" xsd:string property_value: has_example "the most interesting part of Van Gogh's life" xsd:string property_value: has_example "the worst part of a heart-attack" xsd:string [Term] id: span:Occurrent name: occurrent namespace: def: "An entity [bfo:Entity] that has temporal parts and that happens, unfolds or develops through time. Sometimes also called perdurants." [] comment: Definition: An entity [bfo:Entity] that has temporal parts and that happens, unfolds or develops through time. Sometimes also called perdurants. comment: Examples: the life of an organism, a surgical operation as processual context for a nosocomical infection, the spatiotemporal context occupied by a process of cellular meiosis, the most interesting part of Van Gogh's life, the spatiotemporal region occupied by the development of a cancer tumor comment: Synonyms: perdurant synonym: "perdurant" [] is_a: bfo:Entity ! entity disjoint_from: snap:Continuant ! continuant union_of: span:ProcessualEntity ! processual_entity union_of: span:SpatiotemporalRegion ! spatiotemporal_region union_of: span:TemporalRegion ! temporal_region property_value: has_example "a surgical operation as processual context for a nosocomical infection" xsd:string property_value: has_example "the life of an organism" xsd:string property_value: has_example "the most interesting part of Van Gogh's life" xsd:string property_value: has_example "the spatiotemporal context occupied by a process of cellular meiosis" xsd:string property_value: has_example "the spatiotemporal region occupied by the development of a cancer tumor" xsd:string [Term] id: span:Process name: process namespace: def: "A processual entity [span:ProcessualEntity] that is a maximally connected spatiotemporal whole and has bona fide beginnings and endings corresponding to real discontinuities." [] comment: Definition: A processual entity [span:ProcessualEntity] that is a maximally connected spatiotemporal whole and has bona fide beginnings and endings corresponding to real discontinuities. comment: Examples: the life of an organism, the process of sleeping, the process of cell-division is_a: span:ProcessualEntity ! processual_entity disjoint_from: span:FiatProcessPart ! fiat_process_part disjoint_from: span:ProcessAggregate ! process_aggregate disjoint_from: span:ProcessBoundary ! process_boundary disjoint_from: span:ProcessualContext ! processual_context property_value: has_example "the life of an organism" xsd:string property_value: has_example "the process of cell-division" xsd:string property_value: has_example "the process of sleeping" xsd:string [Term] id: span:ProcessAggregate name: process_aggregate namespace: def: "A processual entity [span:ProcessualEntity] that is a mereological sum of process [span:Process] entities and possesses non-connected boundaries." [] comment: Definition: A processual entity [span:ProcessualEntity] that is a mereological sum of process [span:Process] entities and possesses non-connected boundaries. comment: Examples: the beating of the hearts of each of seven individuals in the room, the playing of each of the members of an orchestra, a process of digestion and a process of thinking taken together is_a: span:ProcessualEntity ! processual_entity disjoint_from: span:FiatProcessPart ! fiat_process_part disjoint_from: span:Process ! process disjoint_from: span:ProcessBoundary ! process_boundary disjoint_from: span:ProcessualContext ! processual_context property_value: has_example "a process of digestion and a process of thinking taken together" xsd:string property_value: has_example "the beating of the hearts of each of seven individuals in the room" xsd:string property_value: has_example "the playing of each of the members of an orchestra" xsd:string [Term] id: span:ProcessBoundary name: process_boundary namespace: def: "A processual entity [span:ProcessualEntity] that is the fiat or bona fide instantaneous temporal process boundary." [] comment: Definition: A processual entity [span:ProcessualEntity] that is the fiat or bona fide instantaneous temporal process boundary. comment: Examples: birth, death, the forming of a synapse, the onset of REM sleep, the detaching of a finger in an industrial accident, the final separation of two cells at the end of cell-division, the incision at the beginning of a surgery is_a: span:ProcessualEntity ! processual_entity disjoint_from: span:FiatProcessPart ! fiat_process_part disjoint_from: span:Process ! process disjoint_from: span:ProcessAggregate ! process_aggregate disjoint_from: span:ProcessualContext ! processual_context property_value: has_example "birth" xsd:string property_value: has_example "death" xsd:string property_value: has_example "the detaching of a finger in an industrial accident" xsd:string property_value: has_example "the final separation of two cells at the end of cell-division" xsd:string property_value: has_example "the forming of a synapse" xsd:string property_value: has_example "the incision at the beginning of a surgery" xsd:string property_value: has_example "the onset of REM sleep" xsd:string [Term] id: span:ProcessualContext name: processual_context namespace: def: "An occurrent [span:Occurrent] consisting of a characteristic spatial shape inhering in some arrangement of other occurrent [span:Occurrent] entities. Processual context [span:ProcessualContext] entities are characteristically entities at or in which other occurrent [span:Occurrent] entities can be located or occur." [] comment: Comment: An instance of a processual context [span:ProcessualContext] is a mixture of processual entity [span:ProcessualEntity] which stand as surrounding environments for other processual entity [span:ProcessualEntity] entities. The class processual context [span:ProcessualContext] is the analogous among occurrent [span:Occurrent] entities to the class site [snap:Site] among continuant [snap:Continuant] entities. comment: Definition: An occurrent [span:Occurrent] consisting of a characteristic spatial shape inhering in some arrangement of other occurrent [span:Occurrent] entities. Processual context [span:ProcessualContext] entities are characteristically entities at or in which other occurrent [span:Occurrent] entities can be located or occur. comment: Examples: The processual context for a given manipulation occurring as part of an experiment is made of processual entities which occur in parallel, are not necessarily all parts of the experiment themselves and may involve continuant [snap:Continuant] entities which are in the spatial vicinity of the participants in the experiment. is_a: span:ProcessualEntity ! processual_entity disjoint_from: span:FiatProcessPart ! fiat_process_part disjoint_from: span:Process ! process disjoint_from: span:ProcessAggregate ! process_aggregate disjoint_from: span:ProcessBoundary ! process_boundary property_value: has_example "The processual context for a given manipulation occurring as part of an experiment is made of processual entities which occur in parallel" xsd:string property_value: has_example "are not necessarily all parts of the experiment themselves and may involve continuant [snap:Continuant] entities which are in the spatial vicinity of the participants in the experiment." xsd:string [Term] id: span:ProcessualEntity name: processual_entity namespace: def: "An occurrent [span:Occurrent] that exists in time by occurring or happening, has temporal parts and always involves and depends on some entity." [] comment: Definition: An occurrent [span:Occurrent] that exists in time by occurring or happening, has temporal parts and always involves and depends on some entity. comment: Examples: the life of an organism, the process of meiosis, the course of a disease, the flight of a bird is_a: span:Occurrent ! occurrent disjoint_from: span:SpatiotemporalRegion ! spatiotemporal_region disjoint_from: span:TemporalRegion ! temporal_region union_of: span:FiatProcessPart ! fiat_process_part union_of: span:Process ! process union_of: span:ProcessAggregate ! process_aggregate union_of: span:ProcessBoundary ! process_boundary union_of: span:ProcessualContext ! processual_context property_value: has_example "the course of a disease" xsd:string property_value: has_example "the flight of a bird" xsd:string property_value: has_example "the life of an organism" xsd:string property_value: has_example "the process of meiosis" xsd:string [Term] id: span:ScatteredSpatiotemporalRegion name: scattered_spatiotemporal_region namespace: def: "A spatiotemporal region [span:SpatiotemporalRegion] that has spatial and temporal dimensions and every spatial and temporal point of which is not connected with every other spatial and temporal point of which." [] comment: Definition: A spatiotemporal region [span:SpatiotemporalRegion] that has spatial and temporal dimensions and every spatial and temporal point of which is not connected with every other spatial and temporal point of which. comment: Examples: the space and time occupied by the individual games of the World Cup, the space and time occupied by the individual liaisons in a romantic affair is_a: span:SpatiotemporalRegion ! spatiotemporal_region disjoint_from: span:ConnectedSpatiotemporalRegion ! connected_spatiotemporal_region property_value: has_example "the space and time occupied by the individual games of the World Cup" xsd:string property_value: has_example "the space and time occupied by the individual liaisons in a romantic affair" xsd:string [Term] id: span:ScatteredTemporalRegion name: scattered_temporal_region namespace: def: "A temporal region [span:TemporalRegion] every point of which is not mediately or immediately connected with every other point of which." [] comment: Definition: A temporal region [span:TemporalRegion] every point of which is not mediately or immediately connected with every other point of which. comment: Examples: the time occupied by the individual games of the World Cup, the time occupied by the individual liaisons in a romantic affair is_a: span:TemporalRegion ! temporal_region disjoint_from: span:ConnectedTemporalRegion ! connected_temporal_region property_value: has_example "the time occupied by the individual games of the World Cup" xsd:string property_value: has_example "the time occupied by the individual liaisons in a romantic affair" xsd:string [Term] id: span:SpatiotemporalInstant name: spatiotemporal_instant namespace: def: "A connected spatiotemporal region [span:ConnectedSpatiotemporalRegion] at a specific moment." [] comment: Definition: A connected spatiotemporal region [span:ConnectedSpatiotemporalRegion] at a specific moment. comment: Examples: the spatiotemporal region occupied by a single instantaneous temporal slice (part) of a process is_a: span:ConnectedSpatiotemporalRegion ! connected_spatiotemporal_region disjoint_from: span:SpatiotemporalInterval ! spatiotemporal_interval property_value: has_example "the spatiotemporal region occupied by a single instantaneous temporal slice (part) of a process" xsd:string [Term] id: span:SpatiotemporalInterval name: spatiotemporal_interval namespace: def: "A connected spatiotemporal region [span:ConnectedSpatiotemporalRegion] that endures for more than a single moment of time." [] comment: Definition: A connected spatiotemporal region [span:ConnectedSpatiotemporalRegion] that endures for more than a single moment of time. comment: Examples: the spatiotemporal region occupied by a process or by a fiat processual part is_a: span:ConnectedSpatiotemporalRegion ! connected_spatiotemporal_region disjoint_from: span:SpatiotemporalInstant ! spatiotemporal_instant property_value: has_example "the spatiotemporal region occupied by a process or by a fiat processual part" xsd:string [Term] id: span:SpatiotemporalRegion name: spatiotemporal_region namespace: def: "An occurrent [span:Occurrent] at or in which processual entity [span:ProcessualEntity] entities can be located." [] comment: Comment: All instances of occurrent [span:Occurrent] are spatiotemporal entities, that is, they enter in the relation of (spatiotemporal) location with spatiotemporal region [span:SpatiotemporalRegion] entities. As a particular case, the exact spatiotemporal location of a spatiotemporal region [span:SpatiotemporalRegion] is this region itself. comment: Comment: An instance of the spatiotemporal region [span:SpatiotemporalRegion] is a part of spacetime. All parts of spacetime are spatiotemporal region [span:SpatiotemporalRegion] entities and only spatiotemporal region [span:SpatiotemporalRegion] entities are parts of spacetime. In particular, neither spatial region [snap:SpatialRegion] entities nor temporal region [span:TemporalRegion] entities are in BFO parts of spacetime. Spacetime is the entire extent of the spatiotemporal universe, a designated individual, which is thus itself a spatiotemporal region [span:SpatiotemporalRegion]. Spacetime is among occurrents the analogous of space among continuant [snap:Continuant] entities. comment: Comment: Spacetime and spatiotemporal region [span:SpatiotemporalRegion] entities are entities in their own rights which exist independently of any entities which can be located at them. This view of spacetime can be called \"absolutist\" or \"the container view\". In BFO, the class processual context [span:ProcessualContext] allows for a so-called relational view of spacetime, that is to say, a view according to which spatiotemporality is a matter of relative location between entities and not a matter of being tied to spacetime. In BFO, the bridge between these two views is secured through the fact that instances of processual context [span:ProcessualContext] are too spatiotemporal entities. comment: Definition: An occurrent [span:Occurrent] at or in which processual entity [span:ProcessualEntity] entities can be located. comment: Examples: the spatiotemporal region occupied by a human life, the spatiotemporal region occupied by the development of a cancer tumor, the spatiotemporal context occupied by a process of cellular meiosis is_a: span:Occurrent ! occurrent disjoint_from: span:ProcessualEntity ! processual_entity disjoint_from: span:TemporalRegion ! temporal_region union_of: span:ConnectedSpatiotemporalRegion ! connected_spatiotemporal_region union_of: span:ScatteredSpatiotemporalRegion ! scattered_spatiotemporal_region property_value: has_example "the spatiotemporal context occupied by a process of cellular meiosis" xsd:string property_value: has_example "the spatiotemporal region occupied by a human life" xsd:string property_value: has_example "the spatiotemporal region occupied by the development of a cancer tumor" xsd:string [Term] id: span:TemporalInstant name: temporal_instant namespace: def: "A connected temporal region [span:ConnectedTemporalRegion] comprising a single moment of time." [] comment: Definition: A connected temporal region [span:ConnectedTemporalRegion] comprising a single moment of time. comment: Examples: right now, the moment at which a finger is detached in an industrial accident, the moment at which a child is born, the moment of death is_a: span:ConnectedTemporalRegion ! connected_temporal_region disjoint_from: span:TemporalInterval ! temporal_interval property_value: has_example "right now" xsd:string property_value: has_example "the moment at which a child is born" xsd:string property_value: has_example "the moment at which a finger is detached in an industrial accident" xsd:string property_value: has_example "the moment of death" xsd:string [Term] id: span:TemporalInterval name: temporal_interval namespace: def: "A connected temporal region [span:ConnectedTemporalRegion] lasting for more than a single moment of time." [] comment: Definition: A connected temporal region [span:ConnectedTemporalRegion] lasting for more than a single moment of time. comment: Examples: any continuous temporal duration during which a process occurs is_a: span:ConnectedTemporalRegion ! connected_temporal_region disjoint_from: span:TemporalInstant ! temporal_instant property_value: has_example "any continuous temporal duration during which a process occurs" xsd:string [Term] id: span:TemporalRegion name: temporal_region namespace: def: "An occurrent [span:Occurrent] that is part of time." [] comment: Comment: All instances of occurrent [span:Occurrent] are temporal entities, that is, they enter in the relation of (temporal) location with temporal region [span:TemporalRegion] entities. As a particular case, the exact spatiotemporal location of a temporal region [span:TemporalRegion] is this region itself. Continuant [snap:Continuant] entities are not temporal entities in the technical sense just explained; they are related to time in a different way, not through temporal location but through a relation of existence at a time or during a period of time (see continuant [snap:Continuant]. comment: Comment: An instance of temporal region [span:TemporalRegion] is a part of time. All parts of time are temporal region [span:TemporalRegion] entities and only temporal region [span:TemporalRegion] entities are parts of time. Time is the entire extent of the temporal universe, a designated individual, which is thus a temporal region itself. comment: Comment: Time and temporal region [span:TemporalRegion] entities are entities in their own rights which exist independently of any entities which can be located at them. This view of time can be called \"absolutist\" or \"the container view\" in analogy to what is traditionally the case with space (see spatial region [snap:SpatialRegion]. comment: Definition: An occurrent [span:Occurrent] that is part of time. comment: Examples: the time it takes to run a marathon, the duration of a surgical procedure, the moment of death is_a: span:Occurrent ! occurrent disjoint_from: span:ProcessualEntity ! processual_entity disjoint_from: span:SpatiotemporalRegion ! spatiotemporal_region union_of: span:ConnectedTemporalRegion ! connected_temporal_region union_of: span:ScatteredTemporalRegion ! scattered_temporal_region property_value: has_example "the duration of a surgical procedure" xsd:string property_value: has_example "the moment of death" xsd:string property_value: has_example "the time it takes to run a marathon" xsd:string [Typedef] id: dc:contributor is_metadata_tag: true [Typedef] id: dc:creator is_metadata_tag: true [Typedef] id: dc:format is_metadata_tag: true [Typedef] id: dc:identifier is_metadata_tag: true [Typedef] id: dc:language is_metadata_tag: true [Typedef] id: dc:publisher is_metadata_tag: true [Typedef] id: dc:rights is_metadata_tag: true [Typedef] id: dc:source is_metadata_tag: true [Typedef] id: dc:title is_metadata_tag: true