OBO Download Matrix
This page is for downloading OBO ontologies in a variety of formats, and for downloading reports from each of the ontologies. The data below is derived automatically from the primary sources, available from the main OBO website. This page is experimental. See below for caveats.
- Repository
- Documentation
Ontologies
| Ontology | ID Prefix | Files |
|---|---|---|
| AERO:Adverse Event Reporting Ontology | AERO | pro[31 kb md5] -- obo[17 kb md5] -- obo_xml[24 kb md5] -- owl[60 kb md5] -- tbl[8 kb md5] -- prolog[31 kb md5] -- obo.html[73 kb md5] -- |
| NIF_Cell:NIF Cell | NIF_Cell | pro[461 kb md5] -- obo[292 kb md5] -- obo_xml[535 kb md5] -- owl[459 kb md5] -- tbl[32 kb md5] -- prolog[461 kb md5] -- obo.html[1218 kb md5] -- |
| NIF_Dysfunction:NIF Dysfunction | NIF_Dysfunction | pro[105 kb md5] -- obo[55 kb md5] -- obo_xml[67 kb md5] -- owl[825 kb md5] -- tbl[19 kb md5] -- prolog[105 kb md5] -- obo.html[267 kb md5] -- |
| NIF_GrossAnatomy:NIF Gross Anatomy | NIF_GrossAnatomy | pro[672 kb md5] -- obo[440 kb md5] -- obo_xml[470 kb md5] -- owl[2810 kb md5] -- tbl[99 kb md5] -- prolog[672 kb md5] -- obo.html[1757 kb md5] -- |
| OGMS:Ontology for General Medical Science | OGMS | pro[25 kb md5] -- obo[17 kb md5] -- obo_xml[24 kb md5] -- owl[61 kb md5] -- tbl[11 kb md5] -- prolog[25 kb md5] -- obo.html[71 kb md5] -- |
| adult_mouse_anatomy:Mouse adult gross anatomy | MA | obo_xml[661 kb md5] -- obo[318 kb md5] -- owl[1439 kb md5] -- tbl[105 kb md5] -- prolog[754 kb md5] -- owl2[636 kb md5] -- |
| aeo:Anatomical Entity Ontology | AEO | obo_xml[117 kb md5] -- obo[61 kb md5] -- owl[277 kb md5] -- tbl[30 kb md5] -- prolog[116 kb md5] -- owl2[0 kb md5] -- xref[6 kb md5] -- |
| amphibian_anatomy:Amphibian gross anatomy | AAO | obo_xml[680 kb md5] -- obo[368 kb md5] -- owl[1549 kb md5] -- tbl[173 kb md5] -- prolog[678 kb md5] -- owl2[663 kb md5] -- xref[29 kb md5] -- |
| amphibian_taxonomy:Amphibian taxonomy | ATO | Could not index: Source not available at specified URL as recognised format |
| animalhist:Animal natural history and life history | ADW | |
| ascomycete_phenotype:Ascomycete phenotype ontology | APO | obo_xml[138 kb md5] -- obo[83 kb md5] -- owl[317 kb md5] -- tbl[31 kb md5] -- prolog[172 kb md5] -- owl2[100 kb md5] -- xref[4 kb md5] -- |
| bfo:Basic Formal Ontology | BFO | pro[63 kb md5] -- obo[52 kb md5] -- obo_xml[74 kb md5] -- owl[44 kb md5] -- tbl[8 kb md5] -- prolog[63 kb md5] -- obo.html[151 kb md5] -- imports-local.obo[0 kb md5] -- imports-local.owl[4 kb md5] -- abduced-links.txt[0 kb md5] -- |
| bilateria_mrca:Bilateria anatomy | BILA | obo_xml[47 kb md5] -- obo[26 kb md5] -- owl[95 kb md5] -- tbl[10 kb md5] -- prolog[41 kb md5] -- stats[0 kb md5] -- owl2[39 kb md5] -- xref[2 kb md5] -- |
| biological_process:Biological process | GO | obo_xml[39052 kb md5] -- obo[11770 kb md5] -- obo_xml[21571 kb md5] -- obo[11770 kb md5] -- owl[46084 kb md5] -- tbl[6985 kb md5] -- prolog[24494 kb md5] -- owl2[0 kb md5] -- xref[1121 kb md5] -- |
| biological_process_prerelease:Biological process PRERELEASE | GO | obo_xml[39052 kb md5] -- obo[22754 kb md5] -- owl[84230 kb md5] -- tbl[10636 kb md5] -- prolog[43511 kb md5] -- owl2[0 kb md5] -- xref[2491 kb md5] -- |
| brenda:BRENDA tissue / enzyme source | BTO | obo_xml[2689 kb md5] -- obo[1655 kb md5] -- owl[5836 kb md5] -- tbl[759 kb md5] -- prolog[2680 kb md5] -- owl2[2723 kb md5] -- xref[285 kb md5] -- |
| caro:Common Anatomy Reference Ontology | CARO | obo_xml[22 kb md5] -- obo[12 kb md5] -- owl[68 kb md5] -- tbl[7 kb md5] -- prolog[21 kb md5] -- owl2[22 kb md5] -- xref[1 kb md5] -- |
| cell:Cell type | CL | obo_xml[5145 kb md5] -- obo[2763 kb md5] -- tbl[912 kb md5] -- prolog[4839 kb md5] -- owl2[0 kb md5] -- xref[424 kb md5] -- |
| cell_prerelease:Cell type PRERELEASE | CL | obo_xml[5145 kb md5] -- obo[2763 kb md5] -- tbl[912 kb md5] -- prolog[4839 kb md5] -- owl2[0 kb md5] -- xref[424 kb md5] -- |
| cellular_component:Cellular component | GO | obo_xml[39052 kb md5] -- obo[1281 kb md5] -- obo_xml[2311 kb md5] -- obo[1281 kb md5] -- owl[5157 kb md5] -- tbl[766 kb md5] -- prolog[2303 kb md5] -- owl2[0 kb md5] -- xref[134 kb md5] -- |
| cereal_anatomy:Cereal Plant Gross Anatomy | GRO | obo_xml[1246 kb md5] -- obo[657 kb md5] -- owl[2742 kb md5] -- tbl[203 kb md5] -- prolog[1423 kb md5] -- owl2[0 kb md5] -- xref[48 kb md5] -- |
| chebi:Chemical entities of biological interest | CHEBI | obo_xml[58472 kb md5] -- obo[22682 kb md5] -- owl[131168 kb md5] -- tbl[11443 kb md5] -- prolog[86479 kb md5] -- owl2[0 kb md5] -- xref[1746 kb md5] -- |
| cheminf:Chemical Information Ontology | CHEMINF | pro[21 kb md5] -- obo[14 kb md5] -- obo_xml[22 kb md5] -- owl[34 kb md5] -- tbl[2 kb md5] -- prolog[21 kb md5] -- stats[0 kb md5] -- obo.html[55 kb md5] -- |
| clinical_measurement:Clinical measurement ontology | CMO | |
| cob:Protein covalent bond | RESID | |
| dendritic_cell:Dendritic cell | DC_CL | obo_xml[95 kb md5] -- obo[57 kb md5] -- owl[233 kb md5] -- tbl[12 kb md5] -- prolog[90 kb md5] -- stats[0 kb md5] -- owl2[104 kb md5] -- xref[4 kb md5] -- |
| dendritic_cell_prerelease:Dendritic cell PRERELEASE | DC_CL | obo_xml[95 kb md5] -- obo[57 kb md5] -- owl[233 kb md5] -- tbl[12 kb md5] -- prolog[90 kb md5] -- stats[0 kb md5] -- owl2[104 kb md5] -- |
| dictyostelium_discoideum_anatomy:Dictyostelium discoideum anatomy | DDANAT | obo_xml[113 kb md5] -- obo[60 kb md5] -- owl[273 kb md5] -- tbl[28 kb md5] -- prolog[110 kb md5] -- stats[0 kb md5] -- owl2[106 kb md5] -- xref[6 kb md5] -- |
| disease_ontology:Human disease | DOID | obo_xml[9242 kb md5] -- obo[3704 kb md5] -- owl[24104 kb md5] -- tbl[1346 kb md5] -- prolog[9363 kb md5] -- owl2[3663 kb md5] -- xref[1069 kb md5] -- |
| emap:Mouse gross anatomy and development | EMAP | obo_xml[3236 kb md5] -- obo[1677 kb md5] -- owl[7369 kb md5] -- tbl[630 kb md5] -- prolog[3366 kb md5] -- stats[0 kb md5] -- owl2[3710 kb md5] -- |
| envo:Environment Ontology | ENVO | obo_xml[1044 kb md5] -- obo[451 kb md5] -- owl[2561 kb md5] -- tbl[211 kb md5] -- prolog[1034 kb md5] -- owl2[669 kb md5] -- xref[84 kb md5] -- |
| envo_prerelease:Environment Ontology PRERELEASE | ENVO | obo_xml[1044 kb md5] -- obo[451 kb md5] -- owl[2561 kb md5] -- tbl[211 kb md5] -- prolog[1034 kb md5] -- owl2[669 kb md5] -- xref[84 kb md5] -- |
| event:Event (INOH pathway ontology) | IEV | obo_xml[2169 kb md5] -- obo[1226 kb md5] -- owl[5599 kb md5] -- tbl[380 kb md5] -- prolog[2079 kb md5] -- owl2[1290 kb md5] -- xref[239 kb md5] -- |
| evidence_code:Evidence codes | ECO | obo_xml[171 kb md5] -- obo[103 kb md5] -- owl[333 kb md5] -- tbl[42 kb md5] -- prolog[166 kb md5] -- owl2[0 kb md5] -- xref[5 kb md5] -- |
| evoc:eVOC (Expressed Sequence Annotation for Humans) | EV | obo_xml[170 kb md5] -- obo[69 kb md5] -- owl[353 kb md5] -- tbl[31 kb md5] -- prolog[204 kb md5] -- stats[0 kb md5] -- owl2[186 kb md5] -- |
| experimental_condition:Experimental condition ontology | XCO | |
| fix:Physico-chemical methods and properties | FIX | Could not index: Source not available at specified URL as recognised format |
| fly_anatomy:Drosophila gross anatomy | FBbt | obo_xml[4924 kb md5] -- obo[2901 kb md5] -- owl[11253 kb md5] -- tbl[1067 kb md5] -- prolog[5271 kb md5] -- owl2[3873 kb md5] -- xref[257 kb md5] -- |
| fly_anatomy_prerelease:Drosophila gross anatomy PRERELEASE | FBbt | obo_xml[4924 kb md5] -- obo[2901 kb md5] -- owl[11253 kb md5] -- tbl[1067 kb md5] -- prolog[5271 kb md5] -- owl2[3873 kb md5] -- xref[257 kb md5] -- |
| fly_development:Drosophila development | FBdv | obo_xml[114 kb md5] -- obo[67 kb md5] -- owl[268 kb md5] -- tbl[28 kb md5] -- prolog[112 kb md5] -- owl2[104 kb md5] -- xref[5 kb md5] -- |
| fly_taxonomy:Fly taxonomy | FBsp | obo_xml[1578 kb md5] -- obo[819 kb md5] -- owl[3159 kb md5] -- tbl[325 kb md5] -- prolog[2109 kb md5] -- stats[0 kb md5] -- owl2[1367 kb md5] -- xref[55 kb md5] -- |
| flybase_vocab:FlyBase Controlled Vocabulary | FBcv | obo_xml[275 kb md5] -- obo[181 kb md5] -- owl[551 kb md5] -- tbl[74 kb md5] -- prolog[315 kb md5] -- owl2[218 kb md5] -- xref[8 kb md5] -- |
| fma_lite:Foundational Model of Anatomy (subset) | FMA | obo_xml[21759 kb md5] -- obo[15337 kb md5] -- owl[45629 kb md5] -- tbl[5907 kb md5] -- prolog[28586 kb md5] -- stats[0 kb md5] -- owl2[22430 kb md5] -- |
| fma_lite_prerelease:Foundational Model of Anatomy (subset) PRERELEASE | FMA | obo_xml[21759 kb md5] -- obo[15337 kb md5] -- owl[45629 kb md5] -- tbl[5907 kb md5] -- prolog[28586 kb md5] -- owl2[22430 kb md5] -- |
| fungal_anatomy:Fungal gross anatomy | FAO | obo_xml[44 kb md5] -- obo[21 kb md5] -- owl[104 kb md5] -- tbl[12 kb md5] -- prolog[39 kb md5] -- owl2[41 kb md5] -- xref[3 kb md5] -- |
| fypo:Fission Yeast Phenotype Ontology | FYPO | obo_xml[697 kb md5] -- obo[338 kb md5] -- owl[1594 kb md5] -- tbl[131 kb md5] -- prolog[632 kb md5] -- owl2[0 kb md5] -- xref[19 kb md5] -- |
| gemina_symptom:Symptom Ontology | SYMP | obo_xml[311 kb md5] -- obo[165 kb md5] -- owl[706 kb md5] -- tbl[70 kb md5] -- prolog[325 kb md5] -- owl2[246 kb md5] -- xref[43 kb md5] -- |
| gene_regulation:Gene Regulation Ontology | BOOTStrep | pro[480 kb md5] -- obo[313 kb md5] -- obo_xml[413 kb md5] -- owl[418 kb md5] -- tbl[39 kb md5] -- prolog[480 kb md5] -- stats[0 kb md5] -- obo.html[1208 kb md5] -- |
| habronattus_courtship:Habronattus courtship | Could not index: Source not available at specified URL as recognised format | |
| homology_ontology:homology_ontology | HOM | obo_xml[63 kb md5] -- obo[32 kb md5] -- owl[138 kb md5] -- tbl[9 kb md5] -- prolog[52 kb md5] -- stats[0 kb md5] -- owl2[45 kb md5] -- xref[11 kb md5] -- |
| human-dev-anat-abstract:Human developmental anatomy, abstract version | EHDAA | obo_xml[521 kb md5] -- obo[215 kb md5] -- owl[1237 kb md5] -- tbl[65 kb md5] -- prolog[514 kb md5] -- stats[0 kb md5] -- owl2[474 kb md5] -- xref[1 kb md5] -- |
| human-dev-anat-abstract2:Human developmental anatomy, abstract version, v2 | EHDAA2 | obo_xml[1499 kb md5] -- obo[939 kb md5] -- owl[4036 kb md5] -- tbl[117 kb md5] -- prolog[1345 kb md5] -- owl2[2475 kb md5] -- xref[2 kb md5] -- |
| human-dev-anat-staged:Human developmental anatomy, timed version | EHDA | obo_xml[3235 kb md5] -- obo[1121 kb md5] -- owl[8902 kb md5] -- tbl[224 kb md5] -- prolog[2619 kb md5] -- stats[0 kb md5] -- owl2[1786 kb md5] -- xref[332 kb md5] -- |
| human_embryology_terminology:Terminology of Anatomy of Human Embryology | TAHE | Could not index: Source not available at specified URL as recognised format |
| human_histology_terminology:Terminology of Anatomy of Human Histology | TAHH | Could not index: Source not available at specified URL as recognised format |
| human_phenotype:human phenotype ontology | HP | obo_xml[4416 kb md5] -- obo[2983 kb md5] -- owl[8349 kb md5] -- tbl[1067 kb md5] -- prolog[4797 kb md5] -- owl2[3822 kb md5] -- xref[208 kb md5] -- |
| hymenoptera_anatomy:Hymenoptera Anatomy Ontology | HAO | pro[1079 kb md5] -- obo[616 kb md5] -- obo_xml[1224 kb md5] -- owl[4862 kb md5] -- tbl[261 kb md5] -- prolog[1079 kb md5] -- obo.html[2559 kb md5] -- |
| image:Biological imaging methods | FBbi | obo_xml[155 kb md5] -- obo[96 kb md5] -- owl[258 kb md5] -- tbl[33 kb md5] -- prolog[153 kb md5] -- owl2[138 kb md5] -- xref[2 kb md5] -- |
| infectious_disease_ontology:Infectious disease | IDO | pro[186 kb md5] -- obo[134 kb md5] -- obo_xml[173 kb md5] -- owl[461 kb md5] -- tbl[60 kb md5] -- prolog[186 kb md5] -- obo.html[564 kb md5] -- |
| influenza_ontology:Influenza Ontology | FLU | pro[44 kb md5] -- obo[29 kb md5] -- obo_xml[44 kb md5] -- owl[124 kb md5] -- tbl[19 kb md5] -- prolog[44 kb md5] -- obo.html[131 kb md5] -- |
| information_artifact:Information Artifact Ontology | IAO | pro[78 kb md5] -- obo[54 kb md5] -- obo_xml[68 kb md5] -- owl[1 kb md5] -- tbl[20 kb md5] -- prolog[78 kb md5] -- stats[0 kb md5] -- obo.html[218 kb md5] -- |
| interpro:Protein Domains | IPR | Could not index: Source not available at specified URL as recognised format |
| kisao:Kinetic Simulation Algorithm Ontology | KISAO | owl[428 kb md5] -- obo.html[0 kb md5] -- |
| lipid:Lipid Ontology | LiPrO | pro[1035 kb md5] -- obo[559 kb md5] -- obo_xml[673 kb md5] -- owl[1327 kb md5] -- tbl[73 kb md5] -- prolog[1035 kb md5] -- stats[0 kb md5] -- obo.html[1792 kb md5] -- |
| loggerhead_nesting:Loggerhead nesting | obo_xml[91 kb md5] -- obo[42 kb md5] -- owl[214 kb md5] -- tbl[24 kb md5] -- prolog[90 kb md5] -- stats[0 kb md5] -- owl2[95 kb md5] -- xref[5 kb md5] -- | |
| malaria_ontology:Malaria Ontology | IDOMAL | obo_xml[1378 kb md5] -- obo[783 kb md5] -- owl[2939 kb md5] -- tbl[350 kb md5] -- prolog[1330 kb md5] -- owl2[1190 kb md5] -- xref[71 kb md5] -- |
| mammalian_phenotype:Mammalian phenotype | MP | obo_xml[7010 kb md5] -- obo[3836 kb md5] -- owl[15414 kb md5] -- tbl[2009 kb md5] -- prolog[7134 kb md5] -- owl2[5991 kb md5] -- xref[770 kb md5] -- |
| mao:Multiple alignment | MAO | Could not index: Source not available at specified URL as recognised format |
| measurement_method:Measurement method ontology | MMO | |
| medaka_anatomy_development:Medaka fish anatomy and development | MFO | obo_xml[1018 kb md5] -- obo[500 kb md5] -- owl[2344 kb md5] -- tbl[188 kb md5] -- prolog[1055 kb md5] -- stats[0 kb md5] -- owl2[996 kb md5] -- xref[1 kb md5] -- |
| mged:Microarray experimental conditions | MO | pro[420 kb md5] -- obo[310 kb md5] -- obo_xml[547 kb md5] -- owl[556 kb md5] -- tbl[5 kb md5] -- prolog[420 kb md5] -- stats[0 kb md5] -- obo.html[1345 kb md5] -- |
| minimal_anatomical_terminology:Minimal anatomical terminology | MAT | obo_xml[190 kb md5] -- obo[99 kb md5] -- owl[432 kb md5] -- tbl[17 kb md5] -- prolog[254 kb md5] -- stats[0 kb md5] -- owl2[105 kb md5] -- |
| molecular_function:Molecular function | GO | obo_xml[39052 kb md5] -- obo[7264 kb md5] -- obo_xml[15177 kb md5] -- obo[7264 kb md5] -- owl[33012 kb md5] -- tbl[2884 kb md5] -- prolog[16720 kb md5] -- owl2[0 kb md5] -- xref[1235 kb md5] -- |
| molecule_role:Molecule role (INOH Protein name/family name ontology) | IMR | obo_xml[14711 kb md5] -- obo[4336 kb md5] -- owl[40365 kb md5] -- tbl[1415 kb md5] -- prolog[16995 kb md5] -- owl2[5831 kb md5] -- xref[192 kb md5] -- |
| mosquito_anatomy:Mosquito gross anatomy | TGMA | obo_xml[2063 kb md5] -- obo[948 kb md5] -- owl[4973 kb md5] -- tbl[466 kb md5] -- prolog[2226 kb md5] -- owl2[1528 kb md5] -- xref[57 kb md5] -- |
| mosquito_insecticide_resistance:Mosquito insecticide resistance | MIRO | obo_xml[2213 kb md5] -- obo[984 kb md5] -- owl[4660 kb md5] -- tbl[352 kb md5] -- prolog[1970 kb md5] -- owl2[1568 kb md5] -- xref[149 kb md5] -- |
| mouse_pathology:Mouse pathology | MPATH | obo_xml[378 kb md5] -- obo[203 kb md5] -- owl[820 kb md5] -- tbl[100 kb md5] -- prolog[367 kb md5] -- owl2[303 kb md5] -- xref[26 kb md5] -- |
| ncbi_taxonomy:NCBI organismal classification | NCBITaxon | obo_xml[233174 kb md5] -- obo[126904 kb md5] -- owl[546203 kb md5] -- tbl[43649 kb md5] -- prolog[249375 kb md5] -- owl2[213586 kb md5] -- |
| ncithesaurus:NCI Thesaurus | ncithesaurus | pro[296631 kb md5] -- obo[238895 kb md5] -- obo_xml[339703 kb md5] -- owl[219728 kb md5] -- tbl[5943 kb md5] -- prolog[296631 kb md5] -- obo.html[1091579 kb md5] -- |
| neuro_behavior_ontology:Neuro Behavior Ontology | NBO | obo_xml[355 kb md5] -- obo[202 kb md5] -- owl[609 kb md5] -- tbl[86 kb md5] -- prolog[305 kb md5] -- owl2[270 kb md5] -- xref[16 kb md5] -- |
| nmr:NMR-instrument specific component of metabolomics investigations | NMR | Could not index: Source not available at specified URL as recognised format |
| obi:Ontology for biomedical investigations | OBI | pro[3883 kb md5] -- obo[3350 kb md5] -- obo_xml[3485 kb md5] -- owl[7351 kb md5] -- tbl[620 kb md5] -- prolog[3883 kb md5] -- obo.html[12311 kb md5] -- |
| omrse:Ontology of Medically Related Social Entities | OMRSE | pro[10 kb md5] -- obo[5 kb md5] -- obo_xml[7 kb md5] -- owl[13 kb md5] -- tbl[2 kb md5] -- prolog[10 kb md5] -- stats[4 kb md5] -- obo.html[24 kb md5] -- |
| pathway:Pathway ontology | PW | Could not index: Source not available at specified URL as recognised format |
| pharmacogenomics:Suggested Ontology for Pharmacogenomics | SOPHARM | pro[103 kb md5] -- obo[58 kb md5] -- obo_xml[69 kb md5] -- owl[127 kb md5] -- tbl[6 kb md5] -- prolog[103 kb md5] -- stats[0 kb md5] -- obo.html[177 kb md5] -- |
| plant_environment:Plant Environmental Conditions | EO | obo_xml[235 kb md5] -- obo[115 kb md5] -- owl[528 kb md5] -- tbl[73 kb md5] -- prolog[210 kb md5] -- stats[0 kb md5] -- owl2[216 kb md5] -- xref[12 kb md5] -- |
| plant_ontology:Plant Ontology | PO | obo_xml[1588 kb md5] -- obo[819 kb md5] -- owl[3549 kb md5] -- tbl[272 kb md5] -- prolog[1824 kb md5] -- owl2[0 kb md5] -- xref[57 kb md5] -- |
| plant_trait:Plant Trait Ontology | TO | obo_xml[574 kb md5] -- obo[298 kb md5] -- owl[1229 kb md5] -- tbl[145 kb md5] -- prolog[601 kb md5] -- owl2[495 kb md5] -- xref[23 kb md5] -- |
| plasmodium_life_cycle:Plasmodium life cycle | PLO | obo_xml[4 kb md5] -- obo[3 kb md5] -- owl[9 kb md5] -- tbl[3 kb md5] -- prolog[19 kb md5] -- owl2[5 kb md5] -- |
| platynereis_stage_ontology:Platynereis stage ontology | PD_ST | obo[15 kb md5] -- owl[39 kb md5] -- tbl[8 kb md5] -- prolog[18 kb md5] -- stats[0 kb md5] -- |
| po_anatomy:Plant Anatomy Ontology | PAO | obo_xml[1246 kb md5] -- obo[657 kb md5] -- owl[2742 kb md5] -- tbl[203 kb md5] -- prolog[1423 kb md5] -- owl2[0 kb md5] -- xref[48 kb md5] -- |
| po_temporal:Plant Growth and Development Stage | PGDSO | obo_xml[332 kb md5] -- obo[155 kb md5] -- owl[773 kb md5] -- tbl[68 kb md5] -- prolog[395 kb md5] -- owl2[0 kb md5] -- xref[8 kb md5] -- |
| protein:PRotein Ontology (PRO) | PR | obo_xml[22745 kb md5] -- obo[11859 kb md5] -- owl[48441 kb md5] -- tbl[5719 kb md5] -- prolog[26365 kb md5] -- owl2[0 kb md5] -- xref[712 kb md5] -- |
| protein_prerelease:PRotein Ontology (PRO) PRERELEASE | PR | obo[11859 kb md5] -- tbl[5037 kb md5] -- prolog[26365 kb md5] -- stats[0 kb md5] -- xref[712 kb md5] -- |
| provenance:Proteomics data and process provenance | ProPreO | pro[152 kb md5] -- obo[110 kb md5] -- obo_xml[147 kb md5] -- owl[229 kb md5] -- tbl[14 kb md5] -- prolog[152 kb md5] -- stats[0 kb md5] -- obo.html[420 kb md5] -- |
| psi-mi:Protein-protein interaction | MI | obo_xml[2075 kb md5] -- obo[1040 kb md5] -- owl[4622 kb md5] -- tbl[463 kb md5] -- prolog[2069 kb md5] -- owl2[1359 kb md5] -- xref[172 kb md5] -- |
| psi-mod:Protein modification | MOD | obo_xml[3739 kb md5] -- obo[1608 kb md5] -- owl[8556 kb md5] -- tbl[492 kb md5] -- prolog[3679 kb md5] -- owl2[1790 kb md5] -- xref[378 kb md5] -- |
| psi-ms:Mass spectrometry | MS | obo_xml[725 kb md5] -- obo[405 kb md5] -- owl[1665 kb md5] -- tbl[202 kb md5] -- prolog[714 kb md5] -- owl2[683 kb md5] -- xref[45 kb md5] -- |
| quality:Phenotypic quality | PATO | obo_xml[888 kb md5] -- obo[497 kb md5] -- owl[1903 kb md5] -- tbl[217 kb md5] -- prolog[933 kb md5] -- owl2[0 kb md5] -- xref[42 kb md5] -- |
| relationship:OBO relationship types | OBO_REL | obo_xml[23 kb md5] -- obo[17 kb md5] -- owl[33 kb md5] -- prolog[24 kb md5] -- stats[0 kb md5] -- owl2[11 kb md5] -- xref[0 kb md5] -- |
| rex:Physico-chemical process | REX | obo_xml[214 kb md5] -- obo[127 kb md5] -- owl[472 kb md5] -- tbl[65 kb md5] -- prolog[211 kb md5] -- stats[0 kb md5] -- owl2[216 kb md5] -- xref[18 kb md5] -- |
| rnao:RNA ontology | RNAO | obo_xml[170 kb md5] -- obo[99 kb md5] -- owl[397 kb md5] -- tbl[40 kb md5] -- prolog[189 kb md5] -- owl2[196 kb md5] -- xref[1 kb md5] -- |
| sao:Subcellular anatomy ontology | SAO | pro[648 kb md5] -- obo[526 kb md5] -- obo_xml[862 kb md5] -- owl[857 kb md5] -- tbl[27 kb md5] -- prolog[648 kb md5] -- stats[0 kb md5] -- obo.html[2290 kb md5] -- |
| sep:Sample processing and separation techniques | SEP | obo_xml[1 kb md5] -- obo[274 kb md5] -- owl[3 kb md5] -- prolog[0 kb md5] -- owl2[0 kb md5] -- |
| sequence:Sequence types and features | SO | obo_xml[1307 kb md5] -- obo[706 kb md5] -- owl[2741 kb md5] -- tbl[328 kb md5] -- prolog[1389 kb md5] -- owl2[1177 kb md5] -- xref[68 kb md5] -- |
| sequence_prerelease:Sequence types and features PRERELEASE | SO | obo_xml[1307 kb md5] -- obo[706 kb md5] -- owl[2741 kb md5] -- tbl[328 kb md5] -- prolog[1389 kb md5] -- owl2[1177 kb md5] -- xref[68 kb md5] -- |
| software:Software ontology | SWO | pro[472 kb md5] -- obo[260 kb md5] -- obo_xml[345 kb md5] -- owl[1228 kb md5] -- tbl[64 kb md5] -- prolog[472 kb md5] -- obo.html[1105 kb md5] -- |
| spatial:Spatial Ontology | BSPO | obo_xml[73 kb md5] -- obo[38 kb md5] -- owl[175 kb md5] -- tbl[7 kb md5] -- prolog[71 kb md5] -- owl2[79 kb md5] -- xref[3 kb md5] -- |
| spider_anatomy:Spider Ontology | SPD | obo_xml[242 kb md5] -- obo[124 kb md5] -- owl[559 kb md5] -- tbl[56 kb md5] -- prolog[222 kb md5] -- owl2[257 kb md5] -- xref[10 kb md5] -- |
| systems_biology:Systems Biology | SBO | obo_xml[543 kb md5] -- obo[414 kb md5] -- owl[835 kb md5] -- tbl[343 kb md5] -- prolog[489 kb md5] -- owl2[548 kb md5] -- xref[13 kb md5] -- |
| taxonomic_rank:Taxonomic rank vocabulary | TAXRANK | Could not index: Source not available at specified URL as recognised format |
| teleost_anatomy:Teleost Anatomy Ontology | TAO | obo_xml[1370 kb md5] -- obo[750 kb md5] -- owl[3089 kb md5] -- tbl[356 kb md5] -- prolog[1407 kb md5] -- owl2[0 kb md5] -- xref[48 kb md5] -- |
| teleost_taxonomy:Teleost taxonomy | TTO | obo_xml[26534 kb md5] -- obo[10467 kb md5] -- owl[59207 kb md5] -- tbl[2430 kb md5] -- prolog[28462 kb md5] -- owl2[12517 kb md5] -- xref[2746 kb md5] -- |
| temporal_gramene:Cereal plant development | GRO | Could not index: Source not available at specified URL as recognised format |
| tick_anatomy:Tick gross anatomy | TADS | obo_xml[405 kb md5] -- obo[253 kb md5] -- owl[866 kb md5] -- tbl[142 kb md5] -- prolog[390 kb md5] -- stats[0 kb md5] -- owl2[338 kb md5] -- xref[19 kb md5] -- |
| transmission:Pathogen transmission | TRANS | obo_xml[17 kb md5] -- obo[10 kb md5] -- owl[35 kb md5] -- tbl[6 kb md5] -- prolog[14 kb md5] -- stats[0 kb md5] -- owl2[15 kb md5] -- xref[1 kb md5] -- |
| uberon:Uber anatomy ontology | UBERON | pro[0 kb md5] -- obo[29549 kb md5] -- obo_xml[0 kb md5] -- owl[31733 kb md5] -- prolog[0 kb md5] -- obo.html[0 kb md5] -- |
| unit:Units of measurement | UO | obo_xml[164 kb md5] -- obo[87 kb md5] -- owl[320 kb md5] -- tbl[38 kb md5] -- prolog[147 kb md5] -- owl2[130 kb md5] -- xref[6 kb md5] -- |
| vHOG:verteberate Homologous Organ Groups | vHOG | obo_xml[564 kb md5] -- obo[264 kb md5] -- owl[1313 kb md5] -- tbl[108 kb md5] -- prolog[545 kb md5] -- owl2[584 kb md5] -- xref[39 kb md5] -- |
| vaccine:Vaccine ontology | VO | owl[3350 kb md5] -- obo.html[0 kb md5] -- |
| vertebrate_anatomy:Vertebrate Musculoskeletal Anatomy Ontology | VAO | Could not index: Source not available at specified URL as recognised format |
| worm_anatomy:C. elegans gross anatomy | WBbt | obo_xml[3002 kb md5] -- obo[1360 kb md5] -- owl[7803 kb md5] -- tbl[484 kb md5] -- prolog[2785 kb md5] -- owl2[3586 kb md5] -- xref[150 kb md5] -- |
| worm_development:C. elegans development | WBls | obo_xml[29 kb md5] -- obo[16 kb md5] -- owl[65 kb md5] -- tbl[11 kb md5] -- prolog[28 kb md5] -- stats[0 kb md5] -- owl2[29 kb md5] -- xref[1 kb md5] -- |
| worm_phenotype:C. elegans phenotype | WBPhenotype | obo_xml[1323 kb md5] -- obo[740 kb md5] -- owl[2876 kb md5] -- tbl[454 kb md5] -- prolog[1461 kb md5] -- owl2[1194 kb md5] -- xref[132 kb md5] -- |
| xenopus_anatomy:Xenopus anatomy and development | XAO | obo_xml[637 kb md5] -- obo[351 kb md5] -- owl[1458 kb md5] -- tbl[155 kb md5] -- prolog[567 kb md5] -- owl2[0 kb md5] -- xref[31 kb md5] -- |
| yeast_phenotype:Yeast phenotypes | YPO | obo_xml[125 kb md5] -- obo[75 kb md5] -- owl[287 kb md5] -- tbl[27 kb md5] -- prolog[159 kb md5] -- owl2[89 kb md5] -- xref[4 kb md5] -- |
| zea_mays_anatomy:Maize gross anatomy | ZEA | Could not index: Source not available at specified URL as recognised format |
| zebrafish_anatomy:Zebrafish anatomy and development | ZFA | obo_xml[2528 kb md5] -- obo[1274 kb md5] -- owl[6544 kb md5] -- tbl[403 kb md5] -- prolog[2195 kb md5] -- owl2[2612 kb md5] -- xref[228 kb md5] -- |
| zebrafish_anatomy_prerelease:Zebrafish anatomy and development PRERELEASE | ZFA | obo_xml[2528 kb md5] -- obo[1274 kb md5] -- owl[6544 kb md5] -- tbl[403 kb md5] -- prolog[2195 kb md5] -- owl2[2612 kb md5] -- xref[228 kb md5] -- |
Logical definitions (cross-products)
The following are supplementary to the above ontologies - they enhance existing ontologies with logical definitions (also known colloquially in the GO as cross-products). For more information, see Cross-Products. These files are generated using the Mappings Metadata File. The files listed below are manually vetted cross-products. For a full comprehensive list of automatically generated cross products, see the Obol web page.
Mappings
Links between terms across ontologies or databases. See Mappings page on the OBO Foundry wiki
| Ontology | ID Prefix | Files |
|---|---|---|
| caro_to_bfo:CARO to BFO is_a mappings | caro_to_bfo | obo_xml[2 kb md5] -- obo[1 kb md5] -- owl[6 kb md5] -- tbl[0 kb md5] -- prolog[1 kb md5] -- stats[0 kb md5] -- owl2[2 kb md5] -- imports.obo[0 kb md5] -- imports.owl[0 kb md5] -- |
| cog2go:cog2go mapping | COG2GO | obo_xml[17 kb md5] -- obo[6 kb md5] -- owl[36 kb md5] -- tbl[1 kb md5] -- prolog[6 kb md5] -- stats[0 kb md5] -- owl2[7 kb md5] -- imports.obo[0 kb md5] -- imports.owl[0 kb md5] -- |
| ec2go:ec2go mapping | EC2GO | obo_xml[524 kb md5] -- obo[162 kb md5] -- owl[1437 kb md5] -- tbl[51 kb md5] -- prolog[301 kb md5] -- owl2[269 kb md5] -- xref[91 kb md5] -- imports.obo[0 kb md5] -- imports.owl[0 kb md5] -- |
| egad2go:egad2go mapping | EGAD2GO | obo_xml[9 kb md5] -- obo[3 kb md5] -- owl[24 kb md5] -- tbl[0 kb md5] -- prolog[4 kb md5] -- stats[0 kb md5] -- owl2[4 kb md5] -- imports.obo[0 kb md5] -- imports.owl[0 kb md5] -- |
| genprotec2go:genprotec2go mapping | GENPROTECGO | obo_xml[48 kb md5] -- obo[20 kb md5] -- owl[102 kb md5] -- tbl[3 kb md5] -- prolog[21 kb md5] -- stats[0 kb md5] -- owl2[16 kb md5] -- imports.obo[0 kb md5] -- imports.owl[0 kb md5] -- |
| go_xrf_metadata:GO database cross-references metadata | GO_XRF_ABBS | obo_xml[279 kb md5] -- obo[139 kb md5] -- owl[249 kb md5] -- prolog[156 kb md5] -- owl2[45 kb md5] -- |
| hamap2go:hamap2go mapping | HAMAP2GO | obo_xml[555 kb md5] -- obo[181 kb md5] -- owl[1526 kb md5] -- tbl[53 kb md5] -- prolog[325 kb md5] -- owl2[77 kb md5] -- xref[106 kb md5] -- imports.obo[0 kb md5] -- imports.owl[0 kb md5] -- |
| interpro2go:interpro2go mapping | INTERPRO2GO | obo_xml[4785 kb md5] -- obo[2128 kb md5] -- owl[9379 kb md5] -- tbl[319 kb md5] -- prolog[4195 kb md5] -- owl2[13665 kb md5] -- xref[738 kb md5] -- imports.obo[0 kb md5] -- imports.owl[0 kb md5] -- |
| map_CL-EMAPA:CL to EMAPA mappings | CL-EMAPA | obo_xml[1625 kb md5] -- obo[874 kb md5] -- owl[3986 kb md5] -- tbl[293 kb md5] -- prolog[1736 kb md5] -- stats[0 kb md5] -- owl2[1929 kb md5] -- imports.obo[0 kb md5] -- imports.owl[0 kb md5] -- |
| metacyc2go:metacyc2go mapping | METACYC2GO | obo_xml[682 kb md5] -- obo[259 kb md5] -- owl[1842 kb md5] -- tbl[60 kb md5] -- prolog[422 kb md5] -- owl2[305 kb md5] -- xref[175 kb md5] -- imports.obo[0 kb md5] -- imports.owl[0 kb md5] -- |
| mips2go:mips2go mapping | MIPS2GO | obo_xml[179 kb md5] -- obo[77 kb md5] -- owl[372 kb md5] -- tbl[12 kb md5] -- prolog[82 kb md5] -- stats[0 kb md5] -- owl2[60 kb md5] -- imports.obo[0 kb md5] -- imports.owl[0 kb md5] -- |
| multifun2go:multifun2go mapping | MULTIFUN2GO | obo_xml[126 kb md5] -- obo[48 kb md5] -- owl[274 kb md5] -- tbl[9 kb md5] -- prolog[58 kb md5] -- stats[0 kb md5] -- owl2[42 kb md5] -- imports.obo[0 kb md5] -- imports.owl[0 kb md5] -- |
| oboInOwl:OBO metamodel | oboInOwl | obo_xml[13 kb md5] -- obo[6 kb md5] -- owl[29 kb md5] -- tbl[0 kb md5] -- prolog[12 kb md5] -- stats[0 kb md5] -- owl2[8 kb md5] -- |
| pfam2go:pfam2go mapping | PFAM2GO | obo_xml[1646 kb md5] -- obo[547 kb md5] -- owl[3720 kb md5] -- tbl[132 kb md5] -- prolog[1341 kb md5] -- owl2[796 kb md5] -- xref[244 kb md5] -- imports.obo[0 kb md5] -- imports.owl[0 kb md5] -- |
| prints2go:prints2go mapping | PRINTS2GO | obo_xml[747 kb md5] -- obo[260 kb md5] -- owl[1675 kb md5] -- tbl[58 kb md5] -- prolog[621 kb md5] -- owl2[317 kb md5] -- xref[117 kb md5] -- imports.obo[0 kb md5] -- imports.owl[0 kb md5] -- |
| prodom2go:prodom2go mapping | PRODOM2GO | obo_xml[151 kb md5] -- obo[55 kb md5] -- owl[334 kb md5] -- tbl[11 kb md5] -- prolog[127 kb md5] -- owl2[86 kb md5] -- xref[23 kb md5] -- imports.obo[0 kb md5] -- imports.owl[0 kb md5] -- |
| prosite2go:prosite2go mapping | PROSITE2GO | obo_xml[1183 kb md5] -- obo[419 kb md5] -- owl[2657 kb md5] -- tbl[91 kb md5] -- prolog[996 kb md5] -- owl2[550 kb md5] -- xref[194 kb md5] -- imports.obo[0 kb md5] -- imports.owl[0 kb md5] -- |
| quality_bfo_bridge:PATO BFO constraints | PATO_BFO_BRIDGE | obo_xml[3 kb md5] -- obo[1 kb md5] -- owl[7 kb md5] -- tbl[0 kb md5] -- prolog[2 kb md5] -- stats[0 kb md5] -- owl2[2 kb md5] -- imports.obo[0 kb md5] -- imports.owl[0 kb md5] -- |
| reactome2go:reactome2go mapping | REACTOM2GO | obo_xml[3977 kb md5] -- obo[1414 kb md5] -- owl[10857 kb md5] -- tbl[366 kb md5] -- prolog[2400 kb md5] -- owl2[89 kb md5] -- xref[907 kb md5] -- imports.obo[0 kb md5] -- imports.owl[0 kb md5] -- |
| rfam2go:rfam2go mapping | RFAMGO | obo_xml[126 kb md5] -- obo[41 kb md5] -- owl[292 kb md5] -- tbl[10 kb md5] -- prolog[61 kb md5] -- stats[0 kb md5] -- owl2[5 kb md5] -- imports.obo[0 kb md5] -- imports.owl[0 kb md5] -- |
| ro_bfo_bridge1_1:RO BFO domain and range constraints | OBO_REL_BFO_BRIDGE | obo_xml[3 kb md5] -- obo[1 kb md5] -- owl[8 kb md5] -- prolog[3 kb md5] -- stats[0 kb md5] -- owl2[3 kb md5] -- imports.obo[0 kb md5] -- imports.owl[0 kb md5] -- |
| smart2go:smart2go mapping | SMART2GO | obo_xml[211 kb md5] -- obo[68 kb md5] -- owl[491 kb md5] -- tbl[17 kb md5] -- prolog[173 kb md5] -- owl2[120 kb md5] -- xref[33 kb md5] -- imports.obo[0 kb md5] -- imports.owl[0 kb md5] -- |
| spkw2go:spkw2go mapping | SPKW2GO | obo_xml[116 kb md5] -- obo[43 kb md5] -- owl[254 kb md5] -- tbl[8 kb md5] -- prolog[97 kb md5] -- owl2[143 kb md5] -- xref[17 kb md5] -- imports.obo[0 kb md5] -- imports.owl[0 kb md5] -- |
| tigr2go:tigr2go mapping | TIGR2GO | obo_xml[45 kb md5] -- obo[21 kb md5] -- owl[84 kb md5] -- tbl[2 kb md5] -- prolog[17 kb md5] -- stats[0 kb md5] -- owl2[14 kb md5] -- imports.obo[0 kb md5] -- imports.owl[0 kb md5] -- |
| tigrfams2go:tigrfams2go mapping | TIGRFAMS2GO | obo_xml[1017 kb md5] -- obo[469 kb md5] -- owl[2009 kb md5] -- tbl[65 kb md5] -- prolog[445 kb md5] -- stats[0 kb md5] -- owl2[115 kb md5] -- imports.obo[0 kb md5] -- imports.owl[0 kb md5] -- |
| uberon_anatomy_ontologies_bridge:is_a links to uberon terms | uberon_anatomy_ontologies_bridge | obo_xml[938 kb md5] -- obo[810 kb md5] -- owl[1999 kb md5] -- tbl[196 kb md5] -- prolog[852 kb md5] -- owl2[1980 kb md5] -- imports.obo[1 kb md5] -- imports.owl[1 kb md5] -- |
| um-bbd_enzymeid2go:um-bbd_enzymeid2go mapping | UMBBDENZYMEID2GO | obo_xml[15 kb md5] -- obo[5 kb md5] -- owl[46 kb md5] -- tbl[1 kb md5] -- prolog[9 kb md5] -- owl2[8 kb md5] -- xref[3 kb md5] -- imports.obo[0 kb md5] -- imports.owl[0 kb md5] -- |
| um-bbd_pathwayid2go:um-bbd_pathwayid2go mapping | UMBBDPATHWAYID2GO | obo_xml[17 kb md5] -- obo[6 kb md5] -- owl[52 kb md5] -- tbl[1 kb md5] -- prolog[10 kb md5] -- owl2[9 kb md5] -- xref[3 kb md5] -- imports.obo[0 kb md5] -- imports.owl[0 kb md5] -- |
| vHOG_associations:vHOG_associations | vHOG_ASSOC | imports.obo[0 kb md5] -- imports.owl[0 kb md5] -- |
Formats
The following formats are generated. See below for caveats. All indexed ontologies can be downloaded en-masse for any one particular format, see download section below. The format metadata spec can be found Here
-
obo-- The Obo text format. If this is not the source format, this is generated using flat2obo (part of obo-edit)
-
obo_xml-- The Obo XML format. Generated using go-perl
-
go_ont-- The old deprecated go DAG format. Generated using go-perl
-
owl-- See W3 OWL page for details. Generated from obo-xml using oboxml_to_owl.xsl. See OboInOwl for details of mapping. All obo files converted to owl are made available using the http://purl.org/obo/ URI scheme; for example http://purl.org/obo/GO
-
chadoxml-- See Chado-XML pages. This format can be loaded into a Chado-schema database using a generic loader such as DBStag.
-
godb_prestore-- This format can be loaded into a GO DB schema database using a generic loader such as DBStag.
-
go_rdf-- GO RDF XML format. May soon be deprecated in favour of the OWL export.
-
tbl-- Simple table-based format
-
prolog-- Prolog database. Can be reasoned over using a prolog engine. See obol and blip.
-
owl-classified-by-pellet-- result of running the OWL through the peller classifier. Potentially includes missing subclasses
-
obo-classified-by-oboedit-- result of running the obo through the oboedit reasoner. Potentially includes missing is_a and relationship links. For best results, see the logical definitions files.
Reports
The following reports are generated from each of the ontologies that are indexable
-
validation_report-- reports redundant relationships between classes. This report will be extended to report inconsistences obtained by using a reasoning engine
-
error_report-- reports any syntax errors
-
stats-- Ontology statistics
Download
All the above are available for download on an ftp site:
Compressed tar files are available for the entire download matrix, and also on a per-format basis. No historic archive is maintained, beyond what is provided by the projects managing the individual ontologies
Metadata
Metadata derived from the above ontologies can be downloaded as an xml file here:
- obo-all/ontology_index.xml -- XML
- obo-all/ontology_index.rdf -- RDF
Statistics
Statistics on each indexable ontology is performed as part of the creation of this resource. Individual statistics files are available, per-ontology, above.
- stats.tbl -- tab delimited text
- stats.html -- DHTML table (click on columns to sort)
The tab-delimited version can be used with unix tools such as sort and grep, or imported into an application like Excel.
You can also download stats from previous versions in the archive
Alignment
You can download a basic all-vs-all text alignment of classes in the indexed OBO files above. This is based on text matching using names and synonyms.
This file is updated irregularly and may be out of sync with the above files
Browsing and querying
As yet there is no way to browse all the ontologies as a whole. In future we may provide this using a tool such as AmiGO.
Caveats
- This web page should be considered alpha. The contents may change in the future. The URL is not stable, and caution should be exercised when linking to it
- Not every obo ontology is indexed. Currently we index (deprecated) GO and Obo formatted files. There may be problems with GO formatted files. This is a deprecated format (note: everyone has now switched to obo or another suported format). Ontology maintainers should switch to Obo format.
- Many ontologies reside on sourceforge. Sometimes an ontology will not download correctly because of a sourceforge glitch. If this happens, the ontology will be omitted from the list above, or the ontology from the previous week will be used. Eventually we would like a more robust way of handling this
- Some ontologies such as evoc are supplied as a bundle of separate ontologies. Unfortunately, we do not yet index these. We also do not index ontologies that are not available as a simple one-file download from a URL
- We endeavour to produce this on a weekly basis. System problems may prevent us from doing this. The production of these files is automated, unexpected problems may occur. We hope to make this a more reliable process in the future
- This resource is derived automatically from information submitted to the obo site maintainers. This site is not a substitute for any data or formats made available by the individual ontology providers. The purpose of this site is to make available as much of OBO as possible in a uniform fashion for a variety of formats. For any serious analysis, you should perform the file format conversion yourself using the ontology provided directly by the ontology provider. See main OBO site for obtaining this information.
- The MeSH file should be treated with caution. The source mesh.obo file treats links in MeSH as is_a relations, which is incorrect. This means that the resulting OWL file uses owl:subClassOf, which is also incorrect
-
The NCBI Taxonomy transformation treats this resource
as an ontology of organism types. The taxonomic rank
(species, genus, order, family, phylum, etc)
is treated as a term property_value. These are
translated to annotationProperties in the owl
version. See note below on term property_values with oboedit.
Also note that due to the presence of {} characters in the NCBI Taxonomy you will need oboedit1.1 or oboedit1.100-beta12 or higher, due to a bug in previous versions.
-
In the Obo generated from OWL, owl
AnnotationProperties are converted into oboedit class
properties. You will need
OBO-Edit 1.003-beta1 to be able to load the ontology
without errors. A quick hack is also to simply run
grep -v ^property_value: in.obo > out.oboThis will also lose property values for instances, but these are not currently displayed in oboedit anyway. (will be visible in a future version) -
This page is semantic-web friendly! Try viewing it with Piggy Bank
How this site works
This site is generated using the tools available in the obo sourceforge cvs, under obo/website/utils